Competition for XPO5 binding between Dicer mRNA, pre-miRNA and viral RNA regulates human Dicer levels

Yamina Bennasser1, Christine Chable-Bessia, Robinson Triboulet

  • 1Centre National de la Recherche Scientifique, Institut de Génétique Humaine UPR1142, Montpellier, France.

Insights

Exportin-5 inhibition downregulates Dicer, a key enzyme for microRNA (miRNA) maturation. This cross-regulation impacts cellular physiology and viral replication by affecting Dicer mRNA nuclear export.

Area of Science:

  • Molecular Biology
  • Gene Regulation
  • RNA Interference

Background:

  • MicroRNAs (miRNAs) are crucial regulators of gene expression.
  • The RNA interference (RNAi) pathway involves multiple protein and RNA components.
  • Exportin-5 mediates the nuclear export of pre-miRNAs, essential for miRNA biogenesis.

Purpose of the Study:

  • To investigate the cross-regulatory relationship between exportin-5 and Dicer within the RNAi machinery.
  • To elucidate the molecular mechanism underlying the interaction between exportin-5 and Dicer mRNA.

Main Methods:

  • Inhibition of exportin-5 in human cells.
  • Analysis of Dicer mRNA and protein levels.
  • In vitro binding assays and cellular RNA immunoprecipitation (RIP) to assess RNA-protein interactions.
  • Overexpression studies to titrate exportin-5 levels.
  • Adenoviral infection models.

Main Results:

  • Exportin-5 inhibition led to decreased Dicer expression via post-transcriptional mechanisms.
  • Dicer mRNA exhibited increased nuclear localization upon exportin-5 inhibition.
  • Exportin-5 was shown to directly bind to Dicer mRNA.
  • Overexpression of pre-miRNA or viral RNA saturated exportin-5, disrupting its interaction with Dicer mRNA and reducing Dicer levels.
  • Adenoviral infection mimicked this saturation, enhancing viral replication.

Conclusions:

  • A novel cross-regulatory mechanism exists between pre-miRNAs/viral RNAs and Dicer mediated by exportin-5.
  • Exportin-5 plays a critical role in regulating Dicer expression by controlling Dicer mRNA nuclear export.
  • This interaction is crucial for maintaining cellular homeostasis and can be exploited by viruses for replication.

Related Concept Videos

MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
RNA Interference01:23

RNA Interference

RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
RNA Interference01:23

RNA Interference

RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...