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Complete genome sequence of Arcobacter nitrofigilis type strain (CI)
Standards in Genomic Sciences
|February 10, 2011
Summary
Arcobacter nitrofigilis, a marine nitrogen-fixing bacterium, has its complete genome sequenced for the first time. This study provides insights into the phylogenetic diversity of the Arcobacter genus.
Area of Science:
- Microbiology
- Genomics
- Epsilonproteobacteria
Background:
- Arcobacter nitrofigilis is the type species of the Arcobacter genus, belonging to the Campylobacteraceae family.
- Originally identified as a nitrogen-fixing bacterium associated with Spartina alterniflora roots in marine environments.
- Its symbiotic marine lifestyle presents a phylogenetic contrast to other Arcobacter species often linked to warm-blooded animals and pathogenicity.
Purpose of the Study:
- To describe the features of Arcobacter nitrofigilis.
- To present the complete genome sequence and annotation of the Arcobacter nitrofigilis type strain.
- To contribute to the Genomic Encyclopedia of Bacteria and Archaea project.
Main Methods:
- Whole-genome sequencing of the Arcobacter nitrofigilis type strain.
- Bioinformatic analysis for genome annotation, including identification of protein-coding and RNA genes.
Main Results:
- The complete genome sequence of Arcobacter nitrofigilis was determined to be 3,192,235 bp.
- The genome contains 3,154 protein-coding genes and 70 RNA genes.
- This marks the first complete genome sequence for a type strain of the Arcobacter genus.
Conclusions:
- The genome sequence provides a foundational resource for understanding the biology and evolution of Arcobacter nitrofigilis.
- This work expands the genomic representation of Epsilonproteobacteria, particularly marine symbionts.
- The data facilitates comparative genomics and phylogenetic analyses within the Arcobacter genus.
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