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Updated: Jun 4, 2026

Viability Assays for Cells in Culture
Published on: January 20, 2014
Dead cell counts during serum cultivation are underestimated by the fluorescent live/dead assay
Shengda Zhou1, Zhanfeng Cui, Jill Urban
1Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Oxford, UK.
Abstract:
The live/dead fluorescent assay provides a quick method for assessing the proportion of live and dead cells in cell culture systems or tissues and is widely used. Dead cells are detected by the fluorescence produced when propidium iodide (PI) binds to DNA; PI and similar molecules are excluded from live cells but can penetrate dead cells because of their loss of membrane integrity. Here we investigated the effect of serum in the culture medium on the reliability of the method. We assessed viability of chondrocytes with/without serum using both a live/dead assay kit and also trypan blue staining. We found that after 2 days of culture, the DNA-binding dye PI could no longer detect dead cells if serum was present but they were readily detected in serum-free medium or if an inhibitor to DNase I was added to the serum-containing medium. Dead cells could be detected by trypan blue staining in all cultures. Hence dead cells are no longer detected as the DNase I present in serum degrades their DNA. DNA-binding dyes may thus not give a reliable estimate of the number of dead cells in systems that have been cultured in the presence of serum for several days.
Insights
Serum in cell cultures interferes with live/dead fluorescent assays by degrading DNA, making dead cells undetectable. This impacts the reliability of DNA-binding dyes for cell viability assessment over time.
Area of Science:
- Cell Biology
- Biotechnology
Background:
- Live/dead fluorescent assays are common for assessing cell viability.
- These assays often use DNA-binding dyes like propidium iodide (PI) to detect dead cells with compromised membranes.
Purpose of the Study:
- To investigate the impact of serum in cell culture medium on the accuracy of live/dead fluorescent assays.
- To determine if serum affects the detection of dead cells by DNA-binding dyes.
Main Methods:
- Chondrocyte viability was assessed using a live/dead assay kit and trypan blue staining.
- Cultures were maintained with and without serum, and with a DNase I inhibitor in serum-containing medium.
Main Results:
- Propidium iodide (PI) failed to detect dead cells in serum-containing medium after 2 days of culture.
- Dead cells were detectable by PI in serum-free medium or when DNase I was inhibited.
- Trypan blue staining consistently detected dead cells across all conditions.
Conclusions:
- Serum contains DNase I, which degrades DNA in dead cells, rendering them undetectable by DNA-binding dyes.
- The presence of serum can compromise the reliability of live/dead fluorescent assays for cell viability assessment, especially after prolonged culture.
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