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Published on: April 25, 2015
Highly abundant and stage-specific mRNAs in the obligate pathogen Bremia lactucae
1Department of Vegetable Crops, University of California, Davis 95616.
Abstract:
Germinating spores of the obligate pathogen Bremia lactucae (lettuce downy mildew) contain several unusually abundant species of mRNA. Thirty-nine cDNA clones corresponding to prevalent transcripts were isolated from a library synthesized using poly(A)+ RNA from germinating spores; these clones represented only five distinct classes. Each corresponding mRNA accounted for from 0.4 to 9 percent by mass of poly(A)+ RNA from germinating spores and together represented greater than 20 percent of the mRNA. The expression of the corresponding genes, and a gene encoding Hsp70, was analyzed in spores during germination and during growth in planta. The Hsp70 mRNA and mRNA from one abundant cDNA clone (ham34) were expressed constitutively. Two clones (ham9 and ham12) hybridized only to mRNA from spores and germinating spores. Two clones (ham37 and ham27) showed hybridization specific to germinating spores. Quantification of the number of genes homologous to each cDNA clone indicated that four clones corresponded to one or two copies per haploid genome, and one hybridized to an approximately 11-member family of genes. A sequence of the gene corresponding to ham34 was obtained to investigate its function and to identify sequences conferring high levels of gene expression for use in constructing vectors for the transformation of B. lactucae.
Insights
Lettuce downy mildew (Bremia lactucae) spores contain abundant, specific mRNAs crucial for germination and growth. Researchers identified five key mRNA classes, aiding understanding of pathogen development and potential transformation strategies.
Area of Science:
- Plant Pathology
- Molecular Biology
- Biochemistry
Background:
- Bremia lactucae, the lettuce downy mildew pathogen, exhibits unique molecular characteristics during its life cycle.
- Germinating spores of B. lactucae are known to contain abundant and diverse mRNA species.
Purpose of the Study:
- To identify and characterize abundant mRNA transcripts in germinating Bremia lactucae spores.
- To investigate the expression patterns of these transcripts during spore germination and in planta growth.
- To explore the potential of highly expressed genes for developing transformation vectors for B. lactucae.
Main Methods:
- Isolation and characterization of cDNA clones from poly(A)+ RNA of germinating B. lactucae spores.
- Analysis of mRNA expression using Northern hybridization during germination and in planta.
- Gene copy number determination through hybridization analysis.
- Sequencing of the ham34 gene to investigate its function and expression regulatory elements.
Main Results:
- Five distinct classes of abundant mRNA transcripts were identified, representing over 20% of the total poly(A)+ RNA.
- Hsp70 and ham34 mRNAs were constitutively expressed, while ham9 and ham12 were specific to spores/germinating spores, and ham37/ham27 to germinating spores.
- Gene families varied in size, with one clone corresponding to an 11-member gene family.
- The ham34 gene was sequenced, revealing potential for high-level gene expression.
Conclusions:
- Germinating B. lactucae spores possess a unique transcriptome with several highly abundant and stage-specific mRNAs.
- These abundant transcripts, particularly ham34, offer potential for developing gene expression tools for B. lactucae transformation.
- Understanding these molecular mechanisms is crucial for developing effective disease management strategies against lettuce downy mildew.
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