Related Experiment Video
Updated: Jun 4, 2026

High-throughput Screening for Chemical Modulators of Post-transcriptionally Regulated Genes
Published on: March 3, 2015
Posttranscriptional regulation of ornithine decarboxylase
Shannon L Nowotarski1, Sofia Origanti, Lisa M Shantz
1Department of Cellular and Molecular Physiology, Milton S. Hershey Medical Center, Pennsylvania State University College of Medicine, Hershey, PA, USA.
Abstract:
Activity of the polyamine biosynthetic enzyme ornithine decarboxylase (ODC) and intracellular levels of ODC protein are controlled very tightly. Numerous studies have described ODC regulation at the levels of transcription, translation, and protein degradation in normal cells and dysregulation of these processes in response to oncogenic stimuli. Although posttranscriptional regulation of ODC has been well documented, the RNA binding proteins (RBPs) that interact with ODC mRNA and control synthesis of the ODC protein have not been defined. Using Ras-transformed rat intestinal epithelial cells (Ras12V cells) as a model, we have begun identifying the RBPs that associate with the ODC transcript. Binding of RBPs could potentially regulate ODC synthesis by either changing mRNA stability or rate of mRNA translation. Techniques for measuring RBP binding and translation initiation are described here. Targeting control of ODC translation or mRNA decay could be a valuable method of limiting polyamine accumulation and subsequent tumor development in a variety of cancers.
Insights
Researchers identified RNA binding proteins (RBPs) that control ornithine decarboxylase (ODC) protein synthesis. This discovery offers potential new strategies for cancer therapy by targeting polyamine accumulation.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Ornithine decarboxylase (ODC) activity and protein levels are tightly regulated.
- Dysregulation of ODC is implicated in oncogenic processes and tumor development.
- While ODC regulation is studied at transcriptional, translational, and degradation levels, the specific RNA binding proteins (RBPs) influencing ODC mRNA remain undefined.
Purpose of the Study:
- To identify RBPs that bind to the ODC mRNA transcript.
- To investigate how RBP binding to ODC mRNA affects ODC protein synthesis.
- To explore potential therapeutic strategies targeting ODC mRNA regulation for cancer treatment.
Main Methods:
- Utilized Ras-transformed rat intestinal epithelial cells (Ras12V cells) as a model system.
- Employed techniques to measure RNA binding protein (RBP) association with ODC mRNA.
- Applied methods for assessing mRNA translation initiation rates.
Main Results:
- Initiated the identification of RBPs that associate with the ODC transcript in Ras12V cells.
- Established methodologies for quantifying RBP binding to ODC mRNA and measuring translation initiation.
- Provided a foundation for understanding posttranscriptional control of ODC synthesis.
Conclusions:
- Identifying specific RBPs offers insights into ODC posttranscriptional regulation.
- Targeting ODC translation or mRNA decay presents a potential therapeutic avenue for cancers.
- Limiting polyamine accumulation via ODC regulation could inhibit tumor development.
More Related Videos
11:33Investigating Interactions Between Histone Modifying Enzymes and Transcription Factors in vivo by Fluorescence Resonance Energy Transfer
Published on: October 14, 2022
08:54In vivo Application of the REMOTE-control System for the Manipulation of Endogenous Gene Expression
Published on: March 29, 2019
Related Concept Videos
Regulation of Expression at Multiple Steps
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Master Transcription Regulators
Master Transcription Regulators
What is Gene Expression?