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Updated: Jun 4, 2026

Detection of Live Escherichia coli O157:H7 Cells by PMA-qPCR
Published on: February 1, 2014
Propidium monoazide combined with real-time quantitative PCR underestimates heat-killed Listeria innocua
Trond Løvdal1, Maria Befring Hovda, Benny Björkblom
1Nofima Norconserv AS, Stavanger, Norway. trond.lovdal@nofima.no
Abstract:
The combination of propidium monoazide (PMA) and quantitative real-time PCR (qPCR) significantly overestimated the fraction of viable Listeria innocua as compared to plate counts and confocal fluorescence microscopy. Our data imply that PMA-qPCR must be used with caution as an analytical tool for the differentiation between viable and dead bacteria.
Insights
Propidium monoazide quantitative PCR (PMA-qPCR) overestimated viable Listeria innocua. Researchers advise caution when using PMA-qPCR to distinguish live from dead bacteria.
Area of Science:
- Microbiology
- Molecular Biology
Background:
- Accurate differentiation between viable and dead bacteria is crucial in food safety and clinical diagnostics.
- Quantitative PCR (qPCR) combined with propidium monoazide (PMA) is a common method for this differentiation.
- However, the reliability of PMA-qPCR needs validation against established methods.
Purpose of the Study:
- To evaluate the accuracy of propidium monoazide quantitative PCR (PMA-qPCR) for determining viable Listeria innocua.
- To compare PMA-qPCR results with traditional plate counts and confocal fluorescence microscopy.
Main Methods:
- Bacterial samples of Listeria innocua were treated with PMA.
- DNA was extracted and amplified using qPCR.
- Results were compared with those obtained from standard plate counts and confocal fluorescence microscopy.
Main Results:
- PMA-qPCR significantly overestimated the proportion of viable Listeria innocua cells.
- Discrepancies were noted when compared to both plate counts and confocal fluorescence microscopy.
- This suggests potential inaccuracies in PMA's ability to differentiate live and dead cells in this context.
Conclusions:
- The combination of PMA and qPCR may not reliably distinguish between viable and dead Listeria innocua.
- Caution is advised when employing PMA-qPCR as a sole analytical tool for viability assessment.
- Further research is needed to optimize or validate PMA-qPCR for bacterial viability studies.

