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Updated: Jun 4, 2026

Metagenomic Analysis of Silage

Metagenomic Analysis of Silage

Published on: January 13, 2017

Microbial metagenomics: beyond the genome.

Jack A Gilbert¹, Christopher L Dupont

¹Plymouth Marine Laboratory, Plymouth PL1 3DH, United Kingdom. gilbertjack@gmail.com

Annual Review of Marine Science

|February 19, 2011

Summary

Metagenomics has revolutionized marine microbial ecology, revealing vast genomic data from seawater. Continued exploration promises deeper insights into ocean life and microbial ecosystems.

Area of Science:

Marine Biology
Genomics
Microbial Ecology

Background:

Marine microbial metagenomic databases contain billions of DNA base pairs, yet represent a small fraction of available genetic material in seawater.
The advent of next-generation sequencing technologies has transformed individual laboratory capabilities.
The Global Ocean Sampling expedition has been instrumental in generating large-scale metagenomic data.

Purpose of the Study:

To review the impact of metagenomics on understanding marine microbial communities.
To discuss recent studies and discoveries in marine metagenomics since 2008.
To predict the future of metagenomics in marine microbial ecology.

Main Methods:

Analysis of data from the Global Ocean Sampling expedition.

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Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples

Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples

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Published on: May 28, 2007

Review of next-generation sequencing applications in marine metagenomics.

Discussion of bioinformatic analyses, including conceptual pipelines and sequence annotation.

Main Results:

Metagenomics has significantly expanded our knowledge of marine microbial diversity and function.
Recent studies have yielded novel discoveries in marine microbial ecosystems.
Bioinformatic tools are crucial for interpreting complex metagenomic datasets.

Conclusions:

Metagenomics offers unprecedented views into marine microbial communities.
Future collaborative studies are essential to address fundamental questions in marine microbial ecology.
The field is rapidly advancing, with trillion-base-pair sequencing becoming feasible.