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Multiomics Analysis of TMEM200A as a Pan-Cancer Biomarker
Published on: September 15, 2023
Polymorphisms in the receptor tyrosine kinase MERTK gene are associated with multiple sclerosis susceptibility
Gerry Z M Ma1, Jim Stankovich,
1Multiple Sclerosis Division, Florey Neuroscience Institutes, University of Melbourne, Melbourne, Victoria, Australia.
Abstract:
Multiple sclerosis (MS) is a debilitating, chronic demyelinating disease of the central nervous system affecting over 2 million people worldwide. The TAM family of receptor tyrosine kinases (TYRO3, AXL and MERTK) have been implicated as important players during demyelination in both animal models of MS and in the human disease. We therefore conducted an association study to identify single nucleotide polymorphisms (SNPs) within genes encoding the TAM receptors and their ligands associated with MS. Analysis of genotype data from a genome-wide association study which consisted of 1618 MS cases and 3413 healthy controls conducted by the Australia and New Zealand Multiple Sclerosis Genetics Consortium (ANZgene) revealed several SNPs within the MERTK gene (Chromosome 2q14.1, Accession Number NG_011607.1) that showed suggestive association with MS. We therefore interrogated 28 SNPs in MERTK in an independent replication cohort of 1140 MS cases and 1140 healthy controls. We found 12 SNPs that replicated, with 7 SNPs showing p-values of less than 10(-5) when the discovery and replication cohorts were combined. All 12 replicated SNPs were in strong linkage disequilibrium with each other. In combination, these data suggest the MERTK gene is a novel risk gene for MS susceptibility.
Insights
This study identifies the MERTK gene as a novel risk factor for multiple sclerosis (MS) susceptibility. Genetic analysis revealed specific MERTK gene variants significantly associated with MS in large patient cohorts.
Area of Science:
- Neuroimmunology
- Genetics
- Demyelinating Diseases
Background:
- Multiple sclerosis (MS) is a chronic central nervous system demyelinating disease affecting millions globally.
- TAM receptor tyrosine kinases, including MERTK, are implicated in demyelination processes in MS.
- Genetic associations with MS risk require further investigation.
Purpose of the Study:
- To investigate single nucleotide polymorphisms (SNPs) in TAM receptor genes for association with MS.
- To identify novel genetic risk factors contributing to MS susceptibility.
Main Methods:
- Genome-wide association study (GWAS) in 1618 MS cases and 3413 controls.
- Replication study of 28 MERTK SNPs in 1140 MS cases and 1140 controls.
- Analysis of linkage disequilibrium and combined p-values for SNP association.
Main Results:
- Suggestive association of MERTK gene SNPs with MS identified in the discovery GWAS.
- Replication of 12 MERTK SNPs in an independent cohort.
- Seven SNPs showed strong association (p < 10^-5) when discovery and replication data were combined.
- All replicated SNPs were in high linkage disequilibrium.
Conclusions:
- The MERTK gene is identified as a novel genetic risk factor for multiple sclerosis susceptibility.
- These findings contribute to understanding the genetic basis of MS.
- Further research into MERTK's role in MS pathogenesis is warranted.
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