Related Experiment Video
Updated: Jun 4, 2026

Spatial and Temporal Control of Murine Melanoma Initiation from Mutant Melanocyte Stem Cells
Published on: June 7, 2019
Mutant IDH1 confers an in vivo growth in a melanoma cell line with BRAF mutation
Tatsuhiro Shibata1, Akiko Kokubu, Masashi Miyamoto
1Division of Cancer Genomics, National Cancer Center Research Institute, Tokyo, Japan. tashibat@ncc.go.jp
Abstract:
Melanoma is the most deadly tumor of the skin, and systemic therapies for the advanced stage are still limited. Recent genetic analyses have revealed the molecular diversity of melanoma and potential therapeutic targets. By screening a cohort of 142 primary nonepithelial tumors, we discovered that about 10% of melanoma cases (4/39) harbored an IDH1 or IDH2 mutation. These mutations were found to coexist with BRAF or KIT mutation, and all IDH1 mutations were detected in metastatic lesions. BRAF-mutated melanoma cells, additionally expressing the cancer-related IDH1 mutant, acquired increased colony-forming and in vivo growth activities and showed enhanced activation of the MAPK and STAT3 pathways. Genome-wide gene expression profiling demonstrated that mutant IDH1 affected the expression of a set of genes. Especially, it caused the induction of growth-related transcriptional regulators (Jun, N-myc, Atf3) and the reduction of Rassf1 and two dehydrogenase genes (Dhrs1 and Adh5), which may be involved in the carcinogenesis of IDH1-mutated tumors. Our analyses demonstrate that IDH1 mutation works with other oncogenic mutations and could contribute to the metastasis in melanoma.
Insights
Isocitrate dehydrogenase (IDH) mutations, particularly IDH1, were found in 10% of melanoma cases, often co-occurring with BRAF mutations. These IDH1 mutations may drive melanoma metastasis and tumor growth.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Melanoma is an aggressive skin cancer with limited advanced-stage treatment options.
- Genetic profiling reveals melanoma's molecular heterogeneity and potential therapeutic targets.
Purpose of the Study:
- To investigate the prevalence and role of isocitrate dehydrogenase (IDH) mutations in melanoma.
- To understand how IDH mutations interact with other oncogenic drivers like BRAF and KIT.
Main Methods:
- Screening of 142 primary nonepithelial tumors for IDH1/IDH2 mutations.
- Co-mutation analysis with BRAF and KIT.
- Assessment of cellular growth and pathway activation (MAPK, STAT3) in BRAF-mutated melanoma with IDH1 mutations.
- Genome-wide gene expression profiling.
Main Results:
- IDH1 or IDH2 mutations were identified in approximately 10% (4/39) of melanoma cases.
- IDH mutations frequently coexisted with BRAF or KIT mutations.
- All IDH1 mutations were found in metastatic melanoma lesions.
- BRAF-mutated melanoma cells with mutant IDH1 exhibited increased growth and enhanced MAPK/STAT3 pathway activation.
- Mutant IDH1 altered gene expression, upregulating growth regulators and downregulating tumor suppressors like RASSF1.
Conclusions:
- IDH1 mutations are present in a subset of melanomas and may contribute to metastatic progression.
- The interplay between IDH1 and other oncogenic mutations (e.g., BRAF) influences melanoma aggressiveness.
- Mutant IDH1 impacts gene expression profiles, potentially driving carcinogenesis in melanoma.
Related Concept Videos
Abnormal Proliferation
The Ras Gene
Ras is a superfamily...
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
Induced Pluripotent Stem Cells
Somatic cells are...

