Related Experiment Video
Updated: Jun 4, 2026

Synthesis of Wavelength-shifting DNA Hybridization Probes by Using Photostable Cyanine Dyes
Published on: July 6, 2016
New cyanine dyes or not? Theoretical insights for model chains
1Laboratoire CEISAM-UMR CNRS 6230, Université de Nantes, 2 Rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France. Denis.Jacquemin@univ-nantes.fr
Abstract:
The quest of organic dyes presenting improved electronic features has been extremely active during the last decades, as new structures are necessary to build novel materials such as dye-sensitized solar cells, nonlinear optics commutators, or molecular photochromic switches. Cyanine derivatives occupy a key spot in that scene, as they present intense absorption bands and tunable colors, even when a relatively short π-conjugated path is used. This behavior has often been interpreted as a consequence of a negligible bond length alternation. Recently, Thorley et al. have designed and characterized new cationic compounds that possess the cyanine electronic features, though presenting sizable bond length alternation (Angew. Chem. Int. Ed.2008, 47, 7095-7098). In this contribution, I investigate, with quantum mechanical tools, the size dependence of these properties in model symmetric dyes displaying Thorley's patterns. Extended chains are simulated in order to obtain insights into the chain length convergence, and the results are compared to those obtained at the same level of theory for classical cyanine architectures. This theoretical work is a step toward the rational development of more efficient π-conjugated compounds.
Related Concept Videos
Aldehydes and Ketones with HCN: Cyanohydrin Formation Overview
Aldehydes and Ketones with HCN: Cyanohydrin Formation Mechanism
Aryldiazonium Salts to Azo Dyes: Diazo Coupling
