Caspase recruitment domain 15 gene haplotypes in sarcoidosis

S Pabst1, M Golebiewski, S Herms

  • 1Department of Internal Medicine II, Division of Pneumology, University of Bonn, Bonn, Germany. stefan.pabst@ukb.uni-bonn.de

Tissue Antigens
|March 11, 2011
PubMed

Insights

This study found no link between the caspase recruitment domain 15 (CARD15) gene and sarcoidosis development or its clinical course in Caucasian individuals. Genetic factors in CARD15 do not appear to influence sarcoidosis onset or specific disease phenotypes.

Area of Science:

  • Immunogenetics
  • Systemic Inflammatory Disorders

Background:

  • Sarcoidosis is a systemic granulomatous disease where genetic factors may influence susceptibility and progression.
  • The caspase recruitment domain 15 (CARD15) gene is a candidate for involvement in inflammatory conditions.

Purpose of the Study:

  • To investigate the association between CARD15 gene haplotypes and the development or clinical phenotypes of sarcoidosis.

Main Methods:

  • Genotyping of eight haplotype-tagging single nucleotide polymorphisms (SNPs) in the CARD15 gene using mass spectrometry.
  • Haplotype analysis was performed on 300 Caucasian sarcoidosis patients and 381 matched controls.

Main Results:

  • No significant association was found between CARD15 gene haplotypes and the onset of sarcoidosis.
  • No association was identified between CARD15 gene variations and specific clinical phenotypes of sarcoidosis in the studied cohort.

Conclusions:

  • The CARD15 gene does not appear to play a significant role in the development or specific clinical manifestations of sarcoidosis in this Caucasian population.
  • Further research into other genetic factors may be warranted for understanding sarcoidosis etiology.

Related Concept Videos

Caspases01:24

Caspases

Caspase, a family of cysteine proteases, serve as effectors in apoptosis. The ced3 gene in C.elegans was first identified to be involved in apoptosis. This gene encodes the ced-3 caspase that is similar to the interleukin-1-beta converting enzyme or ICE in mammals. In addition to apoptosis, caspases also function in the inflammatory response. Inflammatory caspases are essential in activating pro-inflammatory cytokines that recruit immune cells and block the replication of pathogens inside cells.
Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...