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Real-Time Polymerase Chain Reaction-Based Detection and Quantification of Hepatitis B Virus DNA
Published on: December 15, 2023
Distribution pattern of HCV genotypes & its association with viral load
Anita Chakravarti1, Gaurav Dogra, Vikas Verma
1Department of Microbiology, Maulana Azad Medical College & Associated Lok Nayak Hospitals, New Delhi, India. anitachakravarti@gmail.com
The Indian Journal of Medical Research
|March 29, 2011
Summary
Hepatitis C virus (HCV) genotype 3 and 1 are most common in Delhi. Genotype 1 shows higher viral load, indicating greater liver disease severity in chronic hepatitis patients.
Area of Science:
- Hepatology
- Virology
- Molecular Biology
Background:
- Hepatitis C virus (HCV) is a major global cause of chronic liver disease, cirrhosis, and liver cancer.
- Accurate HCV genotyping and viral load assessment are crucial for effective treatment strategies.
Purpose of the Study:
- To determine the distribution of HCV genotypes in chronic hepatitis patients.
- To investigate the association between HCV genotypes, viral load, and biochemical profiles.
Main Methods:
- HCV genotyping was performed using restriction fragment length polymorphism (RFLP) and core region sequencing.
- Viral load was quantified using Taqman real-time PCR in 71 HCV RNA-positive patients.
Main Results:
- HCV genotype 3 was most prevalent (63%), followed by genotype 1 (31%) and genotype 2 (5.6%).
- Genotype 1 exhibited significantly higher viral loads compared to genotypes 3 and 2 (P<0.001).
- Parenteral transmission was the most common route, accounting for 68% of cases.
Conclusions:
- HCV genotypes 3 and 1 constitute approximately 95% of infections in Delhi and surrounding regions.
- Atypical subtypes 3i and 3f were identified.
- Genotype 1 is associated with increased liver disease severity, as indicated by higher viral loads.
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