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Identification and Characterization of Immunogenic RNA Species in HDM Allergens that Modulate Eosinophilic Lung Inflammation
Published on: May 30, 2020
Molecular identification of house dust mites and storage mites
Shew Fung Wong1, Ai Ling Chong, Joon Wah Mak
1International Medical University, No. 126, Jalan Jalil Perkasa 19, Bukit Jalil, 57000 Kuala Lumpur, Malaysia. shewfung_wong@imu.edu.my
Abstract:
Mites are known causes of allergic diseases. Currently, identification of mites based on morphology is difficult if only one mite is isolated from a (dust) sample, or when only one gender is found, or when the specimen is not intact especially with the loss of the legs. The purpose of this study was to use polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) of the ITS2 gene, to complement the morphological data for the identification of mites to the species level. For this, six species were cultured: Dermatophagoides pteronyssinus, D. farinae, Blomia tropicalis, Tyrophagus putrescentiae, Aleuroglyphus ovatus and Glycycometus malaysiensis. Genomic DNA of the mites was extracted, quantified, amplified and digested individually with restriction enzymes. Hinf I and Ple I differentiated the restriction patterns of D. pteronyssinus and D. farinae. Bfa I and Alu I enzymes differentiated B. tropicalis and G. malaysiensis. Ple I enzyme was useful for the differentiation between T. putrescentiae and A. ovatus. Bfa I was useful for the differentiation of G. malaysiensis from the rest of the species. In conclusion, different species of mites can be differentiated using PCR-RFLP of ITS2 region. With the established PCR-RFLP method in this study, identification of these mites to the species level is possible even if complete and intact adult specimens of both sexes are not available. As no study to date has reported PCR-RFLP method for the identification of domestic mites, the established method should be validated for the identification of other species of mites that were not included in this study.
Insights
Identifying dust mites causing allergies can be challenging. This study introduces a polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method using the ITS2 gene for accurate species-level identification, even with incomplete samples.
Area of Science:
- Molecular Biology
- Allergen Identification
- Entomology
Background:
- Mites are significant triggers of allergic diseases.
- Morphological identification of mites is often difficult due to incomplete or single specimens.
- Accurate species identification is crucial for understanding mite allergenicity.
Purpose of the Study:
- To develop and validate a polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method for mite identification.
- To utilize the ITS2 gene for species-level differentiation of common domestic mites.
- To complement traditional morphological identification techniques.
Main Methods:
- Culturing of six key mite species: Dermatophagoides pteronyssinus, D. farinae, Blomia tropicalis, Tyrophagus putrescentiae, Aleuroglyphus ovatus, and Glycycometus malaysiensis.
- Extraction, quantification, and amplification of genomic DNA.
- Digestion of amplified DNA with specific restriction enzymes (Hinf I, Ple I, Bfa I, Alu I) followed by RFLP analysis.
Main Results:
- Specific restriction patterns were observed for each mite species using combinations of restriction enzymes.
- Hinf I and Ple I differentiated D. pteronyssinus and D. farinae.
- Bfa I and Alu I differentiated B. tropicalis and G. malaysiensis, while Ple I distinguished T. putrescentiae and A. ovatus. Bfa I also differentiated G. malaysiensis from others.
Conclusions:
- PCR-RFLP of the ITS2 region provides a reliable method for differentiating between various mite species.
- This molecular technique enables accurate species-level identification even with partial or degraded mite specimens.
- The established PCR-RFLP method offers a valuable tool for allergen research and diagnostics, warranting validation for broader mite species identification.
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