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CyClus3D: a Cytoscape plugin for clustering network motifs in integrated networks
Pieter Audenaert1, Thomas Van Parys, Florian Brondel
1Department of Information Technology, Ghent University - IBBT, Gaston Crommenlaan 8/201, B-9050 Gent, Belgium.
Summary:
Network motifs in integrated molecular networks represent functional relationships between distinct data types. They aggregate to form dense topological structures corresponding to functional modules which cannot be detected by traditional graph clustering algorithms. We developed CyClus3D, a Cytoscape plugin for clustering composite three-node network motifs using a 3D spectral clustering algorithm.
Availability:
Via the Cytoscape plugin manager or http://bioinformatics.psb.ugent.be/software/details/CyClus3D.
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