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Updated: Jun 2, 2026

Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation
Published on: February 12, 2022
Locked tether formation by cooperative folding of Rna14p monkeytail and Rna15p hinge domains in the yeast CF IA
Maria Moreno-Morcillo1, Lionel Minvielle-Sébastia, Sébastien Fribourg
1Institut Européen de Chimie et Biologie and INSERM U869, 33607 Pessac Cedex, France.
Abstract:
The removal of the 3' region of pre-mRNA followed by polyadenylation is a key step in mRNA maturation. In the yeast Saccharomyces cerevisiae, one component of the processing machinery is the cleavage/polyadenylation factor IA (CF IA) complex, composed of four proteins (Clp1p, Pcf11p, Rna14p, Rna15p) that recognize RNA sequences adjacent to the cleavage site and recruit additional processing factors. To gain insight into the molecular architecture of CF IA we solved the solution structure of the heterodimer composed of the interacting regions between Rna14p and Rna15p. The C-terminal monkeytail domain from Rna14p and the hinge region from Rna15p display a coupled binding and folding mechanism, where both peptides are initially disordered. Mutants with destabilized monkeytail-hinge interactions prevent association of Rna15p within CF IA. Conservation of interdomain residues reveals that the structural tethering is preserved in the homologous mammalian cleavage stimulation factor (CstF)-77 and CstF-64 proteins of the CstF complex.
Insights
Researchers studied the yeast CF IA complex, crucial for mRNA maturation. They revealed how Rna14p and Rna15p proteins interact, a mechanism conserved in mammals.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- mRNA maturation involves pre-mRNA 3' end processing, including cleavage and polyadenylation.
- The cleavage/polyadenylation factor IA (CF IA) complex in Saccharomyces cerevisiae is essential for this process.
- CF IA comprises four proteins (Clp1p, Pcf11p, Rna14p, Rna15p) that recognize RNA sequences and recruit other factors.
Purpose of the Study:
- To elucidate the molecular architecture of the CF IA complex.
- To understand the interaction between Rna14p and Rna15p within CF IA.
- To investigate the mechanism of their coupled binding and folding.
Main Methods:
- Solution structure determination of the Rna14p-Rna15p heterodimer.
- Analysis of protein-protein interactions within the CF IA complex.
- Site-directed mutagenesis to study the role of specific domains and interactions.
Main Results:
- The study solved the solution structure of the interacting regions between Rna14p and Rna15p.
- A coupled binding and folding mechanism was identified for the Rna14p monkeytail and Rna15p hinge regions.
- Destabilizing mutations in this interaction prevent Rna15p association within CF IA.
- Conserved residues indicate similar structural tethering in mammalian CstF-77 and CstF-64 proteins.
Conclusions:
- The Rna14p-Rna15p interaction is critical for CF IA assembly and function in yeast.
- This structural mechanism is conserved across species, highlighting its fundamental importance in mRNA processing.
- Understanding this interaction provides insights into mRNA 3' end formation regulation.
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