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Related Concept Videos

Somatic to iPS Cell Reprogramming01:29

Somatic to iPS Cell Reprogramming

Reprogramming alters the gene expression in somatic cells, transforming them into induced pluripotent stem (iPS) cells over several generations. Scientists can reprogram cells by introducing genes for four transcription factors—Oct4, Sox2, Klf4, and c-Myc (OSKM) by viral or non-viral methods. These factors are also known as Yamanaka factors after Shinya Yamanaka, who first generated iPS cells using mouse skin cells. Yamanaka was awarded the Nobel Prize in Physiology or Medicine in 2012 for this...
Genomics02:02

Genomics

Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
Methods of Nuclear Reprogramming01:24

Methods of Nuclear Reprogramming

Nuclear reprogramming is a process of transforming one cell type into an unrelated cell type by epigenetic changes that alter the cell’s original gene expression pattern. Such epigenetic changes force cells to express a different set of genes, which play a significant role in inducing transformation into other cell types. Nuclear reprogramming offers applications in reproductive cloning for livestock propagation and regenerative medicine — developing patient-specific cells for injury repair.
Zygotic Development And Stem Cell Formation01:10

Zygotic Development And Stem Cell Formation

The development of all multicellular organisms starts with the fusion of haploid cells called sperm and egg to form a diploid zygote. A zygote is a totipotent cell that can develop into a complete organism. The zygote undergoes cell division or cleavage to form an 8-cell mass. Until this stage, the cells are spherical, loosely attached, and remain totipotent. Totipotent cells are capable of developing both the embryonic and the extraembryonic tissues. However, as they continue to divide, they...
Embryonic Stem Cells00:58

Embryonic Stem Cells

Embryonic stem (ES) cells are undifferentiated pluripotent cells, meaning they can produce any cell type in the body. This gives them tremendous potential in science and medicine since they can generate specific cell types for use in research or to replace body cells lost due to damage or disease.
Embryonic Stem Cells00:57

Embryonic Stem Cells

Embryonic stem (ES) cells were first discovered in mice in 1981 by Martin Evans. In 1998, James Thomson identified a method to isolate embryonic stem cells from humans. Human embryonic stem cells (hESCs) are obtained from 3-5 day old embryos that remain unused after an in vitro fertilization procedure.
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Related Experiment Video

Updated: Jun 2, 2026

A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations
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A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations

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Stem cell genome-to-systems biology.

Na-Yu Chia1, Huck-Hui Ng

  • 1Gene Regulation Laboratory, Genome Institute of Singapore, Singapore.

Wiley Interdisciplinary Reviews. Systems Biology and Medicine
|April 13, 2011
PubMed
Summary

Systems biology enhances understanding of stem cell self-renewal and differentiation. By integrating experimental and computational methods, researchers map the complex regulatory networks essential for regenerative medicine applications.

Area of Science:

  • Stem cell biology
  • Systems biology
  • Genomics

Background:

  • Stem cells possess unique self-renewal and differentiation capabilities.
  • Understanding stem cell molecular mechanisms is key for regenerative medicine.
  • The genome's role in stem cell behavior requires detailed investigation.

Purpose of the Study:

  • To elucidate the molecular processes governing stem cell self-renewal and differentiation.
  • To enhance the understanding of stem cell biology using systems biology approaches.
  • To construct the transcriptional regulatory network of stem cells.

Main Methods:

  • Employing multidisciplinary approaches combining high-throughput experiments with computational and mathematical analysis.
  • Determining molecular constituents that control stem cell characteristics.

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Generation and Downstream Analysis of Single-Cell and Single-Nuclei Transcriptomes in Brain Organoids

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Last Updated: Jun 2, 2026

A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations
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A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations

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Generation and Downstream Analysis of Single-Cell and Single-Nuclei Transcriptomes in Brain Organoids

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  • Conducting functional validations through genetic perturbation and protein location binding analysis.
  • Main Results:

    • Elucidation of protein-protein interactions.
    • Mapping of protein-DNA regulation.
    • Identification of microRNA involvement and epigenetic modifications.

    Conclusions:

    • Systems biology provides a comprehensive understanding of stem cell features.
    • The transcriptional regulatory network is crucial for defining stem cell properties.
    • This research advances the application of stem cells in regenerative medicine.