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Cobweb: a Java applet for network exploration and visualisation.

Joachim von Eichborn1, Philip E Bourne, Robert Preissner

  • 1Structural Bioinformatics Group, Institute for Physiology, Charité - Universitätsmedizin Berlin, Lindenberger Weg 80, 13125 Berlin, Germany. joachim.eichborn@charite.de

Bioinformatics (Oxford, England)
|April 14, 2011
PubMed
Summary
This summary is machine-generated.

Cobweb is a Java applet for interactive network visualization. It allows users to dynamically add nodes and explore network topology in real-time.

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Area of Science:

  • Bioinformatics
  • Computer Science

Background:

  • Cobweb is a freely available Java applet under GPLv3 license.
  • Downloadable from http://bioinformatics.charite.de/cobweb.

Purpose of the Study:

  • To introduce Cobweb, a novel tool for real-time network visualization.
  • To highlight its capabilities in interactive network exploration.

Main Methods:

  • Utilizes a Java applet for network visualization.
  • Enables interactive addition of nodes by querying a server database.
  • Features dynamic network rearrangement for optimal topological views.

Main Results:

  • Provides real-time visualization of network structures.
  • Facilitates interactive exploration and manipulation of networks.
  • Offers dynamic updates and rearrangements for meaningful topological insights.

Conclusions:

  • Cobweb excels in interactive network visualization.
  • Its interactive node addition and dynamic rearrangement offer powerful exploration capabilities.
  • The tool provides a meaningful topological view of networks in real-time.