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Updated: Jun 2, 2026

Spatial Separation of Molecular Conformers and Clusters
Published on: January 9, 2014
Electrostatic barriers in rotaxanes and pseudorotaxanes
Mohamad Hmadeh1, Albert C Fahrenbach, Subhadeep Basu
1Laboratoire de Physico-Chimie Bioinorganique, UdS-CNRS (UMR 7177), Institut de Chimie, Université de Strasbourg, ECPM, 25 rue Becquerel, 67200, Strasbourg, France.
Bipyridinium dications act as effective electrostatic barriers, controlling molecular motion in mechanically interlocked molecules and supramolecular systems in water. This research demonstrates precise control over shuttling and threading behaviors for advanced molecular electronic devices.
Area of Science:
- Supramolecular Chemistry
- Materials Science
- Nanotechnology
Background:
- Controlling molecular motion is crucial for developing advanced molecular electronic devices.
- Mechanically interlocked molecules (MIMs) offer potential for precise molecular control.
- Understanding kinetic barriers is key to designing functional MIMs.
Purpose of the Study:
- To demonstrate the efficacy of bipyridinium (BIPY^2+) dications as electrostatic barriers in aqueous environments.
- To control the shuttling and threading behavior of rotaxanes and pseudorotaxanes.
- To investigate the thermodynamic and kinetic effects of BIPY^2+ on molecular assembly.
Main Methods:
- Synthesis of a degenerate [2]rotaxane using a threading-followed-by-stoppering approach.
- Variable-temperature 1H NMR spectroscopy to determine kinetic barriers.
- Spectrophotometric techniques to study threading and dethreading processes in related supramolecular systems.
Main Results:
- A kinetic barrier exceeding 17 kcal mol^-1 at 343 K was observed for CBPQT(4+) shuttling over a central BIPY^2+ unit.
- BIPY^2+ units significantly influence both thermodynamics and kinetics of pseudorotaxane formation.
- A free energy barrier as high as 21.7 kcal mol^-1 at room temperature was measured for threading involving BIPY^2+.
- BIPY^2+ acts as an electrostatic barrier through Coulombic repulsion and intramolecular self-folding with DNP units.
Conclusions:
- Bipyridinium dications are effective electrostatic barriers for controlling molecular motion in aqueous MIMs and supramolecular systems.
- This control is achieved through a combination of Coulombic repulsion and donor-acceptor interactions.
- The findings enable precise engineering of molecular components for applications in molecular electronics.
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