Genetic diversity and emergence of norovirus GII/4-2006b in Japan during 2006-2007

Shuvra Kanti Dey1, Tung Gia Phan, Masashi Mizuguchi

  • 1Department of Developmental Medical Sciences, Institute of International Health, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.

Clinical Laboratory
|April 20, 2011
PubMed

Insights

Norovirus (NoV) infections are a significant cause of acute gastroenteritis in young children. This study found NoV GII/4 2006b variants were predominant in Japanese pediatric cases during 2006-2007.

Area of Science:

  • Virology
  • Pediatric Infectious Diseases
  • Public Health

Background:

  • Noroviruses (NoV) are a leading cause of acute gastroenteritis in infants and young children globally.
  • Understanding the epidemiology of NoV is crucial for developing effective prevention and control strategies.

Purpose of the Study:

  • To investigate the prevalence and genetic diversity of Norovirus infections in pediatric patients with acute gastroenteritis in Japan.
  • To identify the predominant Norovirus genotypes circulating in this population during the study period.

Main Methods:

  • Collection of 628 fecal specimens from infants and children with acute gastroenteritis across five Japanese locations (July 2006-June 2007).
  • Detection of Norovirus using reverse transcription-polymerase chain reaction (RT-PCR).
  • Molecular characterization of Norovirus strains through nucleotide and amino acid sequencing.

Main Results:

  • A total of 15.6% of specimens tested positive for Norovirus.
  • Norovirus GII was the predominant strain, accounting for 15.5% of cases.
  • Norovirus GII/4 2006b variants were the most prevalent genotype (89% of GII strains), with other genotypes including GII/3, GII/7, and GII/2.
  • Norovirus infections peaked during the winter season.

Conclusions:

  • Norovirus GII/4 2006b variants were the dominant cause of acute gastroenteritis in the Japanese pediatric population studied.
  • Norovirus continues to represent a significant disease burden in this demographic.
  • The findings highlight the importance of ongoing surveillance for Norovirus genotypes and seasonality.
Abstract

Related Concept Videos

Bacterial Gastroenteritis01:18

Bacterial Gastroenteritis

Bacterial gastroenteritis, characterized by diarrhea, abdominal cramps, and vomiting, is often caused by ingestion of contaminated food or water and is frequently associated with pathogenic Escherichia coli strains. These microbes exploit two principal mechanisms to inflict disease.Shiga toxin–producing E. coli, also referred to as STEC—notably O157:H7—release Shiga toxins that target ribosomes, blocking protein synthesis. The B subunit of the toxin binds the host glycolipid receptor...
Investigation of Disease Outbreaks01:23

Investigation of Disease Outbreaks

Multistate foodborne outbreaks pose significant public health risks and require meticulous investigation to identify sources and implement control measures. The Centers for Disease Control and Prevention (CDC) utilizes a dynamic seven-step process for these investigations, integrating data from laboratories, interviews, and environmental assessments to protect public health.Outbreak Detection: The detection of multistate outbreaks typically begins with PulseNet, the CDC's national laboratory...
Evolution of Microbial Genome01:08

Evolution of Microbial Genome

Microbial genome evolution is a highly dynamic process shaped by continual gene gain and loss across species and strains. This genomic flexibility allows microorganisms to adapt rapidly to environmental pressures and interactions with other organisms. Central to understanding this diversity is the distinction between the core and pan genomes.The core genome comprises the genes shared by all sampled strains of a species, representing essential functions needed for fundamental cellular processes.
Infectious Diseases and Their Occurrence01:28

Infectious Diseases and Their Occurrence

Infectious diseases appear in populations through various transmission patterns, influenced by pathogen characteristics, population immunity, environmental conditions, and social behavior. Understanding these patterns is essential for effective public health surveillance and intervention. These categories—sporadic, outbreak, epidemic, pandemic, and endemic—help frame the nature and scope of disease events.Sporadic diseases occur irregularly and infrequently, without a predictable temporal or...
Genome Size and the Evolution of New Genes03:21

Genome Size and the Evolution of New Genes

While every living organism has a genome of some kind (be it RNA, or DNA), there is considerable variation in the sizes of these blueprints. One major factor that impacts genome size is whether the organism is prokaryotic or eukaryotic. In prokaryotes, the genome contains little to no non-coding sequence, such that genes are tightly clustered in groups or operons sequentially along the chromosome. Conversely, the genes in eukaryotes are punctuated by long stretches of non-coding sequence.
Viral Recombination00:57

Viral Recombination

Cells are sometimes infected by more than one virus at once. When two viruses disassemble to expose their genomes for replication in the same cell, similar regions of their genomes can pair together and exchange sequences in a process called recombination. Alternatively, viruses with segmented genomes can swap segments in a process called reassortment.