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Updated: Jun 2, 2026

Assessment of Selective mRNA Translation in Mammalian Cells by Polysome Profiling
Published on: October 28, 2014
CUG-binding protein represses translation of p27Kip1 mRNA through its internal ribosomal entry site
Yuhuan Zheng1, W Keith Miskimins
1Cancer Biology Research Center, Sanford Research/USD, Sioux Falls, and Division of Basic Biomedical Sciences, Sanford School of Medicine of the University of South Dakota, Vermillion, SD, USA. yuzheng@mdanderson.org
Abstract:
The cyclin dependent kinase inhibitor p27 (Kip1) plays an important role in controlling the eukaryotic cell cycle. The 5'-untranslated region of the p27 mRNA harbors an internal ribosome entry site (IRES) which may facilitate synthesis of p27 in certain conditions. In this study, the RNA-associated protein CUGBP1 was shown to interact with the human p27 5'-untranslated region. Overexpression of CUGBP1 inhibited endogenous p27 expression and reduced translation initiation through the p27 IRES. In contrast, repression of CUGBP1 by siRNA transfection enhanced p27 protein levels and stimulated p27 IRES activity. Addition of recombinant CUGBP1 repressed p27 IRES reporter mRNA translation in vitro. At last, Our finding showed that cytosolic form of CUGBP1 binds efficiently to the p27 5'-untranslated region.
Insights
The RNA-binding protein CUGBP1 binds to p27 mRNA
Area of Science:
- Molecular Biology
- Cell Cycle Regulation
- RNA-binding proteins
Background:
- The cyclin-dependent kinase inhibitor p27 (Kip1) is crucial for eukaryotic cell cycle control.
- The p27 mRNA's 5'-untranslated region contains an internal ribosome entry site (IRES) potentially regulating p27 synthesis.
- RNA-binding proteins can modulate mRNA translation and cellular processes.
Purpose of the Study:
- To investigate the interaction between CUGBP1 and the p27 mRNA 5'-untranslated region.
- To determine the effect of CUGBP1 on p27 expression and IRES-mediated translation.
- To elucidate the role of CUGBP1 in regulating p27 protein levels.
Main Methods:
- RNA immunoprecipitation assays to detect CUGBP1-p27 mRNA interaction.
- Western blotting to assess p27 protein levels.
- Reporter assays to measure p27 IRES activity.
- siRNA-mediated knockdown and overexpression of CUGBP1.
- In vitro translation assays with recombinant CUGBP1.
Main Results:
- CUGBP1 directly interacts with the 5'-untranslated region of human p27 mRNA.
- Overexpression of CUGBP1 inhibits endogenous p27 expression and p27 IRES activity.
- Knockdown of CUGBP1 using siRNA enhances p27 protein levels and stimulates p27 IRES activity.
- Recombinant CUGBP1 represses p27 IRES-driven translation in vitro.
- The cytosolic form of CUGBP1 exhibits efficient binding to the p27 5'-untranslated region.
Conclusions:
- CUGBP1 acts as a negative regulator of p27 expression.
- CUGBP1 inhibits translation initiation via the p27 IRES.
- CUGBP1's interaction with p27 mRNA contributes to the regulation of cell cycle progression.
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