Related Experiment Video
Updated: Jun 2, 2026

Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
Prognostic value of FLT3 mutations among different cytogenetic subgroups in acute myeloid leukemia
Fabio P S Santos1, Dan Jones, Wei Qiao
1Department of Leukemia, The University of Texas M. D. Anderson Cancer Center, Houston, Texas, USA.
Background:
The impact of FMS-like tyrosine kinase 3 (FLT3) mutations and mutation burden among cytogenetic subgroups of patients with acute myeloid leukemia (AML) other than normal karyotype (NK) AML is unclear.
Methods:
Patients with newly diagnosed AML were divided among 3 cytogenetic subgroups: core binding factor (CBF) AML, NK-AML, and poor-risk AML.
Results:
In total, 481 patients were included: 13% had, CBF-AML, 57% had NK-AML, and 30% had poor risk AML, and the frequency of any FLT3 mutations was 20%, 32%, and 7.6% in the respective cytogenetic subgroups. FLT3 mutation did not have an impact on event-free survival (EFS) in patients with CBF-AML (P = .84) and poor-risk AML (P = .37). In patients with NK-AML, EFS was worse in the FLT3-internal tandem duplication (ITD) group (20 weeks vs 41 weeks; P < .00,001) but not in the FLT3-tyrosine kinase domain (TKD) point mutation group (61 weeks vs 41 weeks; P = .15). Worse EFS and overall survival (OS) were observed among patients with NK-AML and higher FLT3-ITD burden but not among patients with FLT3-TKD mutation. In multivariate analysis, FLT3-ITD mutation was prognostic of EFS in patients with NK-AML (hazard ratio, 3.1; P = .03).
Conclusions:
FLT3 mutations did not have a prognostic impact in patients with AML who had good-risk and poor-risk karyotypes. In patients with NK-AML, FLT3-ITD mutations led to worse survival, which was even worse among patients who had high mutation burden.
Insights
FMS-like tyrosine kinase 3 (FLT3) mutations impact survival in normal karyotype acute myeloid leukemia (AML), particularly FLT3-internal tandem duplications. High FLT3-ITD burden worsens outcomes in NK-AML patients.
Area of Science:
- Hematology
- Oncology
- Genetics
Background:
- The prognostic significance of FMS-like tyrosine kinase 3 (FLT3) mutations and mutation burden in cytogenetic subgroups of acute myeloid leukemia (AML) remains incompletely understood.
- Investigating these factors in non-normal karyotype (NK) AML is crucial for risk stratification.
Purpose of the Study:
- To evaluate the impact of FLT3 mutations and mutation burden on survival outcomes across different cytogenetic subgroups of AML patients.
- To determine the prognostic value of FLT3-internal tandem duplication (ITD) and FLT3-tyrosine kinase domain (TKD) mutations in AML.
Main Methods:
- Newly diagnosed AML patients were stratified into three cytogenetic subgroups: core binding factor (CBF) AML, NK-AML, and poor-risk AML.
- Analysis included the frequency of FLT3 mutations (ITD and TKD) and their correlation with event-free survival (EFS) and overall survival (OS).
- Multivariate analysis was performed to assess the independent prognostic value of FLT3 mutations.
Main Results:
- FLT3 mutations were detected in 20% of CBF-AML, 32% of NK-AML, and 7.6% of poor-risk AML patients.
- FLT3 mutations did not significantly impact EFS in CBF-AML or poor-risk AML.
- In NK-AML, FLT3-ITD mutations were associated with significantly worse EFS (20 weeks vs. 41 weeks; P < .00,001), while FLT3-TKD mutations did not show a significant impact (61 weeks vs. 41 weeks; P = .15).
- Higher FLT3-ITD mutation burden correlated with worse EFS and OS in NK-AML patients.
- Multivariate analysis confirmed FLT3-ITD as a negative prognostic factor for EFS in NK-AML (HR, 3.1; P = .03).
Conclusions:
- FLT3 mutations lack prognostic impact in AML patients with good-risk (CBF) and poor-risk karyotypes.
- FLT3-ITD mutations portend a worse survival in patients with NK-AML.
- The negative prognostic effect of FLT3-ITD mutations in NK-AML is exacerbated by a high mutation burden.
