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Related Concept Videos

Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
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Ligand Binding and Linkage

Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence the...
Ligand Binding and Linkage00:49

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Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence the...
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Interactions Between Signaling Pathways

Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
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Mapping Bacterial Functional Networks and Pathways in Escherichia Coli using Synthetic Genetic Arrays
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Published on: November 12, 2012

Mapping of Ago2-GW182 functional interactions.

Bing Yao1, Songqing Li, Shang Li Lian

  • 1Department of Oral Biology, University of Florida, Gainesville, FL, USA.

Methods in Molecular Biology (Clifton, N.J.)
|April 30, 2011
PubMed
Summary

The Argonaute 2 (Ago2) and GW182 protein interaction is key for microRNA (miRNA)-mediated gene silencing and recruitment into GW bodies. Methods for mapping this crucial Ago2-GW182 interaction are detailed.

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Area of Science:

  • Molecular Biology
  • Gene Regulation
  • Cell Biology

Background:

  • MicroRNA (miRNA)-mediated gene regulation is vital for biological processes.
  • Argonaute 2 (Ago2) is central to RNA-induced silencing complex (RISC) and miRNA pathways.
  • GW182 protein localizes to GW bodies (GWBs) and interacts with Ago2.

Purpose of the Study:

  • To detail methods for mapping the interaction between Ago2 and GW182.
  • To elucidate the functional significance of the Ago2-GW182 complex in gene silencing.

Main Methods:

  • Detailed experimental protocols for mapping Ago2-GW182 interactions.
  • Techniques for analyzing protein-protein interactions in RNA silencing pathways.

Main Results:

  • The Ago2-GW182 interaction is essential for miRNA-mediated translational silencing.
  • GW182 is required for Ago2 recruitment into GW bodies.
  • GW182 demonstrates potent translational repression, independent of Ago2.

Conclusions:

  • The Ago2-GW182 interaction is a critical nexus for miRNA-mediated gene silencing.
  • Understanding this interaction provides insights into posttranscriptional gene regulation mechanisms.
  • Detailed mapping methods facilitate further research into RNA silencing pathways.