Viral and atypical bacterial detection in acute respiratory infection in children under five years
Patrícia G M Bezerra1, Murilo C A Britto, Jailson B Correia
1Instituto de Medicina Integral Professor Fernando Figueira (IMIP), Recife, Brazil.
Insights
Respiratory Syncytial Virus (RSV) and Mycoplasma pneumoniae (Mpp) cause severe acute respiratory infections (ARI) in Brazilian preschoolers. This study identified common viral and bacterial pathogens in ARI cases, highlighting specific associations with disease severity.
Area of Science:
- Pediatric Infectious Diseases
- Respiratory Virology
- Microbiology
Background:
- Acute respiratory infection (ARI) is a major global cause of childhood illness and death.
- Understanding the specific pathogens responsible for ARI in different clinical presentations is crucial for effective management.
- Preschool children from low-income families in North-East Brazil represent a vulnerable population for ARI.
Purpose of the Study:
- To identify the viral and atypical bacterial agents causing ARI in preschool children in North-East Brazil.
- To correlate specific pathogens with different severities and clinical manifestations of ARI.
- To investigate the role of co-infections in ARI among this population.
Main Methods:
- Prospective collection of clinical/demographic data and nasopharyngeal aspirates (NPA) from children under 5 with ARI.
- Classification of disease severity based on respiratory signs, hospitalization, and oxygen requirements.
- Multiplex PCR used to detect 17 common respiratory viral and atypical bacterial pathogens in NPA samples.
Main Results:
- Pathogens were detected in 85.5% of 407 recruited children, with high rates of co-infection (39.5%).
- Most prevalent pathogens included Respiratory Syncytial Virus (RSV; 37%), Adenoviruses (AdV; 25%), and Rhinoviruses (hRV; 19%).
- RSV was linked to more severe bronchiolitis, and Mycoplasma pneumoniae (Mpp; 10%) to more severe pneumonia cases, with Mpp found in 17% of hospitalized pneumonia cases.
Conclusions:
- Viral and atypical bacterial pathogens are significant contributors to ARI in preschool children in this region.
- While pathogens are common across ARI severities, RSV and Mpp show specific associations with severe bronchiolitis and pneumonia, respectively.
- The findings underscore the complex epidemiology of ARI pathogens and the need for targeted interventions.
Background:
Acute respiratory infection (ARI) is a leading cause of morbidity and mortality in children worldwide. This study aimed to determine the viral and atypical bacterial causes of different severities and clinical manifestations of ARI in preschool children from low-income families in North-East Brazil.
Methods:
Clinical/demographic data and nasopharyngeal aspirates (NPA) were prospectively collected from children <5 years presenting with ARI over one year to a paediatric A&E department. Disease severity was grouped according to presence of lower respiratory tract signs, need for hospital admission and need for oxygen. Clinical manifestation of ARI was based on discharge diagnosis from hospital with four conditions predominating: bronchiolitis, pneumonia, episodic viral wheeze/asthma and upper respiratory tract infection. Multiplex PCR was used to detect 17 common respiratory viral and atypical bacterial pathogens in NPA.
Findings:
407 children with a median age of eight months were recruited. Pathogens were detected in 85·5% samples with co-infection being particularly common (39·5%). Respiratory Syncytial Virus (RSV; 37%), Adenoviruses (AdV; 25%), Rhinoviruses (hRV; 19%), Bocavirus (hBoV; 19%), human Meta-pneumovirus (hMPV; 10%) and Mycoplasma pneumoniae (Mpp; 10%) were most prevalent. Detection and co-infection rates were similar in all severities and clinical manifestations of ARI apart from RSV, which was associated with more severe disease and specifically more severe cases of bronchiolitis, and Mpp, which was associated with more severe cases of pneumonia. Mpp was detected in 17% of children admitted to hospital with pneumonia.
Interpretation:
This study underlines the importance of viral and atypical bacterial pathogens in ARI in pre-school children and highlights the complex epidemiology of these pathogens in this age group. Generally, viruses and atypical bacteria were detected in all severities and clinical manifestations of ARI but RSV and Mpp were associated with more severe cases of bronchiolitis and pneumonia respectively.
Related Concept Videos
Respiratory Syncytial Virus Disease
Atypical Pneumonia
Acute Pharyngitis
Acute pharyngitis is the inflammation of the back of the throat (pharynx), commonly resulting in a sore throat. It is a frequently encountered condition that prompts individuals to seek medical advice.
Classification
Acute pharyngitis can be categorized based on its underlying cause:
Viral Meningitis
Pneumonia III: Complications and Assessment
Acute Pyelonephritis II: Diagnostic Studies and Management

