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Published on: June 30, 2023
A cell-based screen identifies ATR inhibitors with synthetic lethal properties for cancer-associated mutations
Luis I Toledo1, Matilde Murga, Rafal Zur
1Genomic Instability Group, Spanish National Cancer Research Centre, Madrid, Spain.
Abstract:
Oncogene activation has been shown to generate replication-born DNA damage, also known as replicative stress. The primary responder to replicative stress is not Ataxia-Telangiectasia Mutated (ATM) but rather the kinase ATM and Rad3-related (ATR). One limitation for the study of ATR is the lack of potent inhibitors. We here describe a cell-based screening strategy that has allowed us to identify compounds with ATR inhibitory activity in the nanomolar range. Pharmacological inhibition of ATR generates replicative stress, leading to chromosomal breakage in the presence of conditions that stall replication forks. Moreover, ATR inhibition is particularly toxic for p53-deficient cells, this toxicity being exacerbated by replicative stress-generating conditions such as the overexpression of cyclin E. Notably, one of the compounds we identified is NVP-BEZ235, a dual phosphatidylinositol-3-OH kinase (PI3K) and mTOR inhibitor that is being tested for cancer chemotherapy but that we now show is also very potent against ATM, ATR and the catalytic subunit of DNA-dependent protein kinase (DNA-PKcs).
Insights
Researchers identified potent ATR inhibitors using a cell-based screen. ATR inhibition causes DNA damage and is toxic to p53-deficient cells, especially with replication stress. NVP-BEZ235 shows broad kinase inhibition.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- Oncogene activation induces replication stress, a type of DNA damage.
- The ATM and Rad3-related (ATR) kinase is a key responder to replicative stress.
- A lack of potent ATR inhibitors has limited research in this area.
Purpose of the Study:
- To develop a cell-based screening strategy to identify ATR inhibitors.
- To investigate the effects of ATR inhibition on DNA damage and cell toxicity.
- To characterize novel ATR inhibitors, including their activity against other kinases.
Main Methods:
- A cell-based screening assay was employed to identify compounds with ATR inhibitory activity.
- The effects of ATR inhibition on chromosomal breakage were assessed under conditions that stall replication forks.
- Cellular toxicity of ATR inhibition was evaluated in p53-deficient cells, particularly when combined with replicative stress conditions.
Main Results:
- A screening strategy successfully identified compounds with nanomolar ATR inhibitory activity.
- Pharmacological ATR inhibition leads to replicative stress and chromosomal breakage.
- ATR inhibition exhibits significant toxicity in p53-deficient cells, exacerbated by conditions like cyclin E overexpression.
- NVP-BEZ235, a PI3K/mTOR inhibitor, was identified as a potent inhibitor of ATM, ATR, and DNA-PKcs.
Conclusions:
- A novel screening approach effectively identified potent ATR inhibitors.
- ATR inhibition is a promising strategy for targeting cancer, especially in p53-deficient contexts.
- NVP-BEZ235 possesses broad kinase inhibitory activity, including against ATR, suggesting potential for multi-targeted cancer therapy.
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