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RNA interference targeting cathepsin B of the carcinogenic liver fluke, Opisthorchis viverrini
Jittiyawadee Sripa1, Porntip Pinlaor, Paul J Brindley
1Department of Parasitology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Abstract:
Functional genomics have not been reported for Opisthorchis viverrini or the related fish-borne fluke, Clonorchis sinensis. Here we describe the introduction by square wave electroporation of Cy3-labeled small RNA into adult O. viverrini worms. Adult flukes were subjected to square wave electroporation employing a single pulse for 20 ms of 125V in the presence of 50 microg/ml of Cy3-siRNA. The parasites tolerated this manipulation and, at 24 and 48 h after electroporation, fluorescence from the Cy3-siRNA was evident throughout the parenchyma of the worms, with strong fluorescence evident in the guts and reproductive organs of the adult worms. Second, other worms were treated using the same electroporation settings with double stranded RNA targeting an endogenous papain-like cysteine protease, cathepsin B. This manipulation resulted in a significant reduction in specific mRNA levels encoding cathepsin B, and a significant reduction in cathepsin B activity against the diagnostic peptide, Z-Arg-Arg-AMC. This appears to be the first report of introduction of reporter genes into O. viverrini and the first report of experimental RNA interference (RNAi) in this fluke. The findings indicated the presence of an intact RNAi pathway in these parasites which, in turn, provides an opportunity to probe gene functions in this neglected tropical disease pathogen.
Insights
Researchers successfully introduced small RNA into Opisthorchis viverrini flukes using electroporation. This functional genomics approach enabled RNA interference (RNAi), paving the way for studying gene function in this neglected tropical disease pathogen.
Area of Science:
- Parasitology
- Molecular Biology
- Functional Genomics
Background:
- Functional genomics data is lacking for Opisthorchis viverrini and Clonorchis sinensis, important fish-borne trematodes.
- Understanding gene function is crucial for developing control strategies against these neglected tropical disease pathogens.
Purpose of the Study:
- To establish methods for introducing nucleic acids into O. viverrini.
- To demonstrate the feasibility of RNA interference (RNAi) in O. viverrini.
- To investigate the potential for functional genomics in O. viverrini.
Main Methods:
- Adult O. viverrini worms were subjected to square wave electroporation with Cy3-labeled small interfering RNA (siRNA).
- siRNA delivery was confirmed by fluorescence microscopy at 24 and 48 hours post-electroporation.
- Double-stranded RNA targeting cathepsin B was used to induce RNAi, and its effects on mRNA levels and enzyme activity were assessed.
Main Results:
- Electroporation successfully introduced Cy3-labeled siRNA into O. viverrini, with fluorescence observed in various tissues including the gut and reproductive organs.
- Electroporation was well-tolerated by the parasites.
- RNAi targeting cathepsin B resulted in a significant reduction in both specific mRNA levels and cathepsin B activity.
- This study represents the first report of reporter gene introduction and experimental RNAi in O. viverrini.
Conclusions:
- An intact RNA interference pathway exists in O. viverrini.
- Electroporation is a viable method for introducing nucleic acids and performing functional genomics in O. viverrini.
- These findings provide a foundation for future research into gene function and potential therapeutic targets in this important parasite.
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