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Updated: Jun 2, 2026

Comparative Proteomic Analysis of Whole Kidney, Medulla, and Cortical Tubules in Diabetic Pathogenesis of Kidney Injury in Mice
Published on: May 2, 2025
Chronic kidney disease-related atherosclerosis - proteomic studies of blood plasma
Magdalena Luczak1, Dorota Formanowicz2, Elzbieta Pawliczak3
1Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704 Poznan, Poland.
Insights
Proteomic analysis reveals distinct differences in plasma proteins between chronic kidney disease (CKD) and cardiovascular disease (CVD) patients, highlighting unique pathways in atherosclerosis development. These findings offer insights into CKD- and CVD-mediated plaque formation.
Area of Science:
- Proteomics
- Cardiovascular Science
- Nephrology
Background:
- Atherosclerosis significantly increases cardiovascular mortality in chronic kidney disease (CKD) patients.
- Factors driving CKD-associated plaque formation remain poorly understood.
Purpose of the Study:
- To compare plasma proteomes in CKD, cardiovascular disease (CVD), and healthy volunteers (HV).
- To identify proteins differentially expressed in CKD and CVD, elucidating mechanisms of atherosclerosis.
Main Methods:
- Comparative proteomic analysis of blood plasma.
- Utilized 2D electrophoresis and mass spectrometry for protein identification.
- Analyzed samples from 75 CKD patients, 25 CVD patients, and 25 HV.
Main Results:
- α-1-microglobulin, apolipoprotein A-IV, γ-fibrinogen, and haptoglobin were differentially abundant in CKD vs. HV.
- Similar proteins were identified in CVD vs. HV comparisons.
- α-1-microglobulin and apolipoprotein A-IV showed significant differences between CKD and CVD groups.
Conclusions:
- CKD and CVD involve distinct processes in atherosclerosis plaque formation.
- Inflammation appears more pronounced in CKD patients.
- Differential regulation of apolipoprotein A-IV suggests varying cholesterol transport efficacy between CKD and CVD.
Background:
Atherosclerosis is considered the major cause of the dramatic increase in cardiovascular mortality among patients suffering from chronic kidney disease (CKD). Although the close connection between atherosclerosis and kidney dysfunction is undeniable, factors enhancing CKD-mediated plaque formation are still not well recognized.
Results:
To increase our knowledge of this process we carried out a comparative proteomic analysis of blood plasma proteins isolated from 75 patients in various stages of renal dysfunction (CKD group), 25 patients with advanced cardiovascular disease (CVD group) and 25 healthy volunteers (HV group). The collected samples were subjected to 2D electrophoresis. Then, individual proteins were identified by mass spectrometry. The comparative analysis involving CKD and HV groups showed a differential accumulation of α-1-microglobulin, apolipoprotein A-IV, γ-fibrinogen and haptoglobin in patients with kidney disease. Exactly the same proteins were identified as differentially expressed when proteomes of CVD patients and HV were compared. However, a direct comparison of CKD and CVD groups revealed significant differences in the accumulation of two proteins: α-1-microglobulin and apolipoprotein A-IV.
Conclusions:
The obtained results indicate that at least two processes differentially contribute to the plaque formation in CKD- and CVD-mediated atherosclerosis. It seems that the inflammatory process is more intense in CKD patients. On the other hand, the down- and up-regulation of apolipoprotein A-IV in CVD and CKD groups, respectively, suggests that substantial differences exist in the efficacy of cholesterol transport in both groups of patients.
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Atherosclerosis I: Introduction
