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A Chromatin Immunoprecipitation Assay to Identify Novel NFAT2 Target Genes in Chronic Lymphocytic Leukemia
Published on: December 4, 2018
Interferon regulatory factor 2 binding protein 2 is a new NFAT1 partner and represses its transcriptional activity
Flávia R G Carneiro1, Renata Ramalho-Oliveira, Giuliana P Mognol
1Division of Cellular Biology, Brazilian National Cancer Institute, Rio de Janeiro, Brazil.
Abstract:
The nuclear factor of activated T cells (NFAT) family of transcription factors is expressed in a wide range of cell types and regulates genes involved in cell cycle, differentiation, and apoptosis. NFAT proteins share two well-conserved regions, the regulatory domain and the DNA binding domain. The N- and C-terminal ends are transactivation sites and show less sequence similarity, whereas their molecular functions remain poorly understood. Here, we identified a transcriptional repressor, interferon regulatory factor 2 binding protein 2 (IRF-2BP2), which specifically interacts with the C-terminal domain of NFAT1 among the NFAT family members. IRF-2BP2 was described as a corepressor by inhibiting both enhancer-activated and basal transcription. Gene reporter assays demonstrated that IRF-2BP2 represses the NFAT1-dependent transactivation of NFAT-responsive promoters. The ectopic expression of IRF-2BP2 in CD4 T cells resulted in decreased interleukin-2 (IL-2) and IL-4 production, supporting a repressive function of IRF-2BP2 for NFAT target genes. Furthermore, NFAT1 and IRF-2BP2 colocalized in the nucleus in activated cells, and the mutation of a newly identified nuclear localization signal in the IRF-2BP2 rendered it cytoplasmic, abolishing its repressive effect on NFAT1 activity. Collectively, our data demonstrate that IRF-2BP2 is a negative regulator of the NFAT1 transcription factor and suggest that NFAT1 repression occurs at the transcriptional level.
Insights
Interferon regulatory factor 2 binding protein 2 (IRF-2BP2) acts as a transcriptional repressor, specifically inhibiting the NFAT1 transcription factor. This interaction reduces the production of key immune signaling molecules like IL-2 and IL-4.
Area of Science:
- Molecular Biology
- Immunology
- Transcription Regulation
Background:
- Nuclear factor of activated T cells (NFAT) proteins are crucial transcription factors regulating cell cycle, differentiation, and apoptosis.
- NFAT proteins possess conserved DNA-binding and regulatory domains, but their N- and C-terminal transactivation sites have poorly understood functions.
Purpose of the Study:
- To identify novel regulators of NFAT1 activity.
- To elucidate the molecular mechanism by which IRF-2BP2 interacts with and modulates NFAT1 function.
Main Methods:
- Interaction studies to identify proteins binding to NFAT1's C-terminal domain.
- Gene reporter assays to assess the impact of IRF-2BP2 on NFAT1-driven transcription.
- Ectopic expression of IRF-2BP2 in CD4 T cells to evaluate its effect on cytokine production.
- Subcellular localization studies of IRF-2BP2 and its functional mutants.
Main Results:
- Interferon regulatory factor 2 binding protein 2 (IRF-2BP2) was identified as a specific interactor of the NFAT1 C-terminal domain.
- IRF-2BP2 functions as a transcriptional repressor, inhibiting NFAT1-dependent transactivation of target gene promoters.
- Ectopic IRF-2BP2 expression in CD4 T cells led to decreased production of interleukin-2 (IL-2) and IL-4.
- NFAT1 and IRF-2BP2 colocalize in the nucleus of activated cells; nuclear localization of IRF-2BP2 is essential for its repressive activity.
Conclusions:
- IRF-2BP2 is a novel negative regulator of the NFAT1 transcription factor.
- IRF-2BP2 mediates transcriptional repression of NFAT1 activity, impacting immune cell function.
- The nuclear localization of IRF-2BP2 is critical for its role in repressing NFAT1.
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