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Updated: Jun 1, 2026

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Modification and Functionalization of the Guanidine Group by Tailor-made Precursors
Published on: April 27, 2017
1-(2-Methyl-5-nitro-phenyl)guanidinium picrate
Summary
This study details the crystal structure of a guanidinium picrate salt, revealing extensive hydrogen bonding and pi-pi interactions. Conformational differences were noted between the crystal structure and theoretical models.
Area of Science:
- Crystallography
- Supramolecular Chemistry
- Computational Chemistry
Background:
- Guanidinium salts are important in various chemical applications.
- Picrate anions are known for their strong interactions.
- Understanding crystal packing is crucial for material properties.
Purpose of the Study:
- To elucidate the crystal structure of the guanidinium picrate salt.
- To analyze the hydrogen bonding and intermolecular interactions within the crystal lattice.
- To compare the experimental crystal structure with computationally derived models.
Main Methods:
- Single-crystal X-ray diffraction was used to determine the crystal structure.
- Analysis of hydrogen bonding networks, including three-centre/bifurcated bonds.
- Density Functional Theory (DFT) calculations for geometry optimization and comparison.
Main Results:
- The crystal structure reveals extensive hydrogen bonding between the guanidinium cation and picrate anion.
- Key interactions include N(+)-H⋯O(-), N-H⋯O, C-H⋯O bonds, and two three-centre/bifurcated bonds.
- Significant π-π stacking interactions were observed with specific centroid-to-centroid distances and slippage angles.
- Conformational discrepancies exist between the experimental structure and DFT-optimized models.
Conclusions:
- The crystal packing is dominated by a complex network of hydrogen bonds and π-π interactions.
- The study highlights the importance of experimental crystallographic data for validating computational models.
- Observed conformational differences suggest limitations in current DFT methods for this specific system.

