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Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry
Published on: June 21, 2018
IL-1 polymorphisms in children with peptic symptoms in South China
Juan Li1, Fangjin Wang, Qiang Zhou
1Department of Laboratories, the Second Affiliated Hospital of GuangZhou Medical University, Guangzhou, China.
Insights
Interleukin-1 (IL-1) gene polymorphisms, specifically IL-1B-511TT/-31CC, are linked to severe gastric changes in children. This finding suggests a genetic predisposition to gastritis and ulcers in young individuals in South China.
Area of Science:
- Genetics
- Gastroenterology
- Pediatrics
Background:
- Interleukin-1 (IL-1) gene cluster polymorphisms are linked to gastric mucosal changes and IL-1β expression in adults, particularly with H. pylori infection.
- H. pylori virulence differs between adults and children, necessitating specific research in pediatric populations.
Purpose of the Study:
- To investigate the association between IL-1 gene polymorphisms and gastric mucosal histological changes in young children in South China.
- To determine if IL-1 polymorphisms are risk factors for peptic symptoms in pediatric patients.
Main Methods:
- Genotyping of IL-1B-511, IL-1B-31, and IL-1RN polymorphisms in 128 children with peptic symptoms.
- Analysis of IL-1β mRNA expression using real-time PCR ddCT assay.
- Correlation of genetic data with gastric mucosal histology and H. pylori status.
Main Results:
- IL-1B-31T and IL-1B-511C polymorphisms were found to be completely linked.
- Significant differences in IL-1B-511/-31 genotypes were observed across different clinical outcomes (p=0.001).
- The IL-1B-511TT/-31CC genotype was prevalent (60.7%) in children with moderate to severe gastritis or gastric ulcers. No association was found between IL-1RN genotypes, H. pylori infection, or IL-1β mRNA expression and gastric histology.
Conclusions:
- Children with the IL-1B-511TT/-31CC genotype may be at increased risk for developing severe gastric mucosal histological changes.
- These findings highlight the potential role of specific IL-1 gene polymorphisms in pediatric gastric disease susceptibility in South China.
Background:
Polymorphisms of IL-1 gene cluster are reported to be associated with histological changes and IL-1β expression in the gastric mucosa in adults, especially in Helicobacter pylori-infected subjects. As H. pylori infecting adults and children own different virulence genotypes, the aim of this study was to investigate whether IL-1 polymorphisms are risk factors in young children in South China.
Materials And Methods:
A total of 128 children with peptic symptoms were enrolled in this study. Polymorphisms of IL-1B-511 and IL-1B-31 were identified by dual fluorescence PCR. Variable number of tandem repeat region in IL-1RN was detected by conventional PCR and IL-1β mRNA expression by real-time PCR ddCT assay.
Results:
IL-1B-31T and IL-1B-511C were completely linked in this study. Significant differences of IL-1B-511/-31 genotypes were observed among different clinical outcomes (p = .001). The IL-1B-511TT/-31CC was mostly found in the moderate gastritis and the above (severe gastritis or gastric ulcer) groups, with percentage of 60.7%. While no association was observed between IL-1RN genotypes and the gastric mucosal histological changes (p = .128). Also no relationships were found between IL-1 polymorphisms and H. pylori infection or gastric mucosal IL-1β mRNA expression level.
Conclusion:
Children with IL-1B-511TT/-31CC may have a risk to develop relatively severe gastric mucosal histological changes in South China.
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