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Modification and Functionalization of the Guanidine Group by Tailor-made Precursors
Published on: April 27, 2017
(5-n-Hexyl-2-hydroxymethyl-1,3-dioxan-2-yl)methanol.
The crystal structure of a C(12)H(24)O(4) compound reveals a chair conformation for its dioxane ring and an extended zigzag for the n-hexyl chain. Molecules form zigzag chains via hydrogen bonds, creating a herringbone pattern in the crystal.
Area of Science:
- Organic Chemistry
- Crystallography
- Molecular Structure
Background:
- Understanding molecular conformations and intermolecular interactions is crucial in crystal engineering.
- The study of organic compounds with dioxane rings provides insights into their structural properties.
Purpose of the Study:
- To elucidate the crystal structure and molecular arrangement of the title compound, C(12)H(24)O(4).
- To investigate the conformational preferences of the dioxane ring and the n-hexyl chain.
- To analyze the intermolecular interactions, specifically hydrogen bonding, within the crystal lattice.
Main Methods:
- Single-crystal X-ray diffraction was employed to determine the three-dimensional structure.
- Conformational analysis was performed on the dioxane ring and the n-hexyl substituent.
- Analysis of hydrogen bonding networks and crystal packing was conducted.
Main Results:
- The dioxane ring adopts a chair conformation.
- The n-hexyl chain adopts an extended, zigzag conformation in an equatorial position.
- Molecules are linked by O-H⋯O hydrogen bonds, forming zigzag chains along the b axis.
- A characteristic herringbone packing pattern was observed in the crystal.
Conclusions:
- The study successfully determined the crystal structure of C(12)H(24)O(4), highlighting specific conformational preferences.
- The observed hydrogen bonding pattern dictates the formation of zigzag chains and the overall herringbone crystal structure.
- This detailed structural information contributes to the understanding of molecular assembly in organic crystals.
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