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Isolation and Cultivation of Neural Progenitors Followed by Chromatin-Immunoprecipitation of Histone 3 Lysine 79 Dimethylation Mark
Published on: January 26, 2018
Histone deacetylase activity is necessary for left-right patterning during vertebrate development
Katia Carneiro1, Claudia Donnet, Tomas Rejtar
1Department of Biology Center for Regenerative and Developmental Biology Tufts University, Medford, MA 02155 USA.
Histone deacetylase (HDAC) activity and its binding partner Mad3, regulated by serotonin (5HT), are crucial for establishing left-right body axis asymmetry in Xenopus embryos by controlling Nodal related 1 (Nr1) gene expression.
Area of Science:
- Developmental Biology
- Epigenetics
- Molecular Biology
Background:
- Left-right (LR) axis asymmetry is vital for vertebrate embryogenesis.
- Asymmetric Nodal related 1 (Nr1) gene expression in Xenopus is essential for organ situs.
- Early serotonin (5HT) movement influences Nr1 asymmetry, but downstream mechanisms remain unclear.
Purpose of the Study:
- Investigate epigenetic regulation in LR patterning.
- Identify mechanisms linking early biophysical cues to Nr1 transcriptional asymmetry.
- Determine the role of Histone Deacetylase (HDAC) and serotonin signaling in LR axis determination.
Main Methods:
- Injected dominant-negative HDAC mRNA into Xenopus embryos.
- Used pharmacological blockade to inhibit HDAC activity during specific developmental stages.
- Performed high-throughput proteomic screening to identify 5HT-binding partners of epigenetic machinery.
- Utilized mutant forms of Mad3 protein to assess 5HT-binding dependency.
Main Results:
- HDAC inhibition during cleavage stages abolished Nr1 expression and caused heterotaxia (randomized organ situs).
- Epigenetic marker H3K4me2 was deposited on the Nr1 gene following HDAC inhibition.
- Identified Mad3 as a 5HT-binding protein linked to the epigenetic machinery.
- Mad3 overexpression caused Nr1 absence and heterotaxia; a non-5HT binding mutant Mad3 did not.
Conclusions:
- HDAC activity is a novel determinant of LR asymmetry, controlling the epigenetic state of Nr1.
- Mad3 acts as a serotonin-dependent regulator, bridging early physiological asymmetries to stable gene expression changes.
- This study reveals a new pathway linking serotonin signaling, epigenetics, and organogenesis asymmetry.
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