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Updated: Jun 1, 2026

Biochemical and Structural Characterization of the Carbohydrate Transport Substrate-binding-protein SP0092
Published on: October 2, 2017
Pilus backbone protein PitB of Streptococcus pneumoniae contains stabilizing intramolecular isopeptide bonds
Dorothea Zähner1, Ashish R Gandhi, Olga Stuchlik
1Division of Infectious Diseases, Department of Medicine, Emory University School of Medicine, 1639 Pierce Dr., Suite 2101, Atlanta, GA 30322, USA. dzahner@emory.edu
Abstract:
Streptococcus pneumoniae type 2 pili are recently identified fimbrial structures extending from the bacterial surface and formed by polymers of the structural protein PitB. Intramolecular isopeptide bonds are a characteristic of the related pilus backbone protein Spy0128 of group A streptococci. Based on the identification of conserved residues in PitB, we predicted two intramolecular isopeptide bonds in PitB. Using a combination of tandem mass spectrometry and Edman sequencing, we show that these bonds were formed between Lys(63)-Asn(214) and Lys(243)-Asn(372) in PitB. Mutant proteins lacking the intramolecular isopeptide bonds retained the proteolytic stability observed with the wild type protein. However, absence of these bonds substantially decreased the melting temperature of the PitB-derivatives, indicating a stabilizing function of these bonds in PitB of the pneumococcal type 2 pilus.
Insights
Streptococcus pneumoniae type 2 pili are stabilized by intramolecular isopeptide bonds in the PitB protein. These bonds enhance pilus thermal stability without affecting proteolytic resistance.
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- Streptococcus pneumoniae type 2 pili are emerging fimbrial structures.
- These pili are polymers of the structural protein PitB.
- Intramolecular isopeptide bonds stabilize related pilus proteins.
Purpose of the Study:
- To investigate the presence and function of intramolecular isopeptide bonds in PitB.
- To determine the specific locations of these bonds within PitB.
Main Methods:
- Tandem mass spectrometry
- Edman sequencing
- Analysis of mutant PitB proteins lacking isopeptide bonds.
Main Results:
- Two intramolecular isopeptide bonds were identified in PitB: Lys(63)-Asn(214) and Lys(243)-Asn(372).
- Mutant PitB proteins without these bonds showed reduced thermal stability (lower melting temperature).
- Proteolytic stability was comparable between wild-type and mutant PitB proteins.
Conclusions:
- Intramolecular isopeptide bonds play a crucial role in the thermal stabilization of pneumococcal type 2 pili.
- These bonds contribute to the structural integrity of PitB, a key component of these pili.
Related Concept Videos
Cytoskeletal Proteins in Bacteria
Fimbriae, Pili, and Axial Filaments
Peptidoglycan Synthesis
Protein-protein Interfaces
Inhibitors of Gram-positive Cell Wall Synthesis
Peptide Bonds

