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Updated: Jun 1, 2026

Probing the Structure and Dynamics of Interfacial Water with Scanning Tunneling Microscopy and Spectroscopy
Published on: May 27, 2018
Spanning QTAIM topology phase diagrams of water isomers W4, W5 and W6
Samantha Jenkins1, Albeiro Restrepo, Jorge David
1College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan 410081, China. sj@beaconresearch.org
Abstract:
Structural and chemical properties of the small water clusters W(4), W(5) and W(6) are investigated with the theory of atoms and molecules (QTAIM). For the W(4), W(5) and W(6) clusters, nine, fourteen and twenty-seven conformers, respectively, have been analyzed. For the W(4), W(5) and W(6) clusters one, two and three of these structures, respectively, have not been reported before. We then proceed to extend the W(4), W(5) and W(6) water cluster topology space using QTAIM; the Poincaré-Hopf topological sum rules are applied to create rules to identify the spanning set of conformer topologies, this includes finding three, ten and eight new distinct topologies that satisfy the Poincaré-Hopf relation for W(4), W(5) and W(6) respectively. The topological stability of degenerate solutions to the Poincaré-Hopf relation is compared by evaluating the proximity to rupturing of critical points of the gradient vector field of the charge density. We introduce a QTAIM topology space to replace the inconsistent use of Euclidean geometry to determine whether a cluster is 1-, 2- or 3-D. We show from the topology of the charge density that the conformers of the W(4), W(5) clusters are more energetically stable in less compact, planar forms, conversely the conformers of W(6) are more energetically stable with compact 3-D topologies. Quantifying the degree of covalent character in the hydrogen bonding for the W(4), W(5) and W(6) clusters independently verifies this finding. Differences in simple rules for the number of hydrogen bonds obeying the Bernal-Fowler ice rules between W(4), W(5) and W(6) reflect the transition from 2-D to 3-D structures being more energetically stable. In addition, we identify a new class of O-O bonding interactions that are up to 48% longer than the inter-nuclear separation and appear to be failed hydrogen bonds.
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