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Updated: Jun 1, 2026

A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
Published on: June 16, 2022
The role of the precursor structure in the biogenesis of microRNA
Julia Starega-Roslan1, Edyta Koscianska, Piotr Kozlowski
1Laboratory of Cancer Genetics, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14 Str, 61-704, Poznan, Poland.
Abstract:
The human genome contains more than 1,000 microRNA (miRNA) genes, which are transcribed mainly by RNA polymerase II. The canonical pathway of miRNA biogenesis includes the nuclear processing of primary transcripts (pri-miRNAs) by the ribonuclease Drosha and further cytoplasmic processing of pre-miRNAs by the ribonuclease Dicer. This review discusses the issue of miRNA end heterogeneity generated primarily by Drosha and Dicer cleavage and focuses on the structural aspects of the Dicer step of miRNA biogenesis. We examine the structures of miRNA precursors, both predicted and experimentally determined, as well as the influence of various motifs that disturb the regularity of pre-miRNA structure on Dicer cleavage specificity. We evaluate the structural determinants of the length diversity of miRNA generated by Dicer from different precursors and highlight the importance of asymmetrical motifs. Finally, we discuss the impact of Dicer protein partners on cleavage efficiency and specificity and propose the contribution of pre-miRNA structural plasticity to the dynamics of the dicing complex.
Insights
MicroRNA (miRNA) end heterogeneity arises from Drosha and Dicer processing. This review explores how precursor structures and Dicer partners influence miRNA length and specificity.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- MicroRNAs (miRNAs) are key regulators encoded by over 1,000 human genes.
- miRNA biogenesis involves nuclear processing by Drosha and cytoplasmic processing by Dicer.
- End heterogeneity in miRNAs is a significant biological phenomenon.
Purpose of the Study:
- To review the structural basis of miRNA end heterogeneity during Dicer processing.
- To investigate how precursor structure and Dicer interactions influence miRNA length and specificity.
- To highlight the role of structural plasticity in miRNA biogenesis.
Main Methods:
- Analysis of predicted and experimentally determined miRNA precursor structures.
- Evaluation of structural motifs affecting Dicer cleavage specificity.
- Examination of Dicer protein partners and their impact on processing.
Main Results:
- Precursor structure, particularly asymmetrical motifs, dictates Dicer cleavage site selection.
- Structural variations in pre-miRNAs lead to diverse miRNA lengths.
- Dicer partners modulate cleavage efficiency and specificity.
Conclusions:
- Pre-miRNA structural plasticity is crucial for Dicer complex dynamics.
- Understanding Dicer processing is key to controlling miRNA biogenesis and function.
- Structural determinants of miRNA heterogeneity offer insights into gene regulation.
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