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Updated: Jun 1, 2026

Reconstitution of Msp1 Extraction Activity with Fully Purified Components
Published on: August 10, 2021
Presequence-dependent folding ensures MrpL32 processing by the m-AAA protease in mitochondria
Florian Bonn1, Takashi Tatsuta, Carmelina Petrungaro
1Institute for Genetics, Center for Molecular Medicine (CMMC), Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany.
Abstract:
m-AAA proteases exert dual functions in the mitochondrial inner membrane: they mediate the processing of specific regulatory proteins and ensure protein quality control degrading misfolded polypeptides to peptides. Loss of these activities leads to neuronal cell death in several neurodegenerative disorders. However, it is unclear how the m-AAA protease chooses between specific processing and complete degradation. A central and conserved function of the m-AAA protease is the processing of the ribosomal subunit MrpL32, which regulates ribosome biogenesis and the formation of respiratory complexes. Here, we demonstrate that the formation of a tightly folded domain harbouring a conserved CxxC-X(9)-CxxC sequence motif halts degradation initiated from the N-terminus and triggers the release of mature MrpL32. Oxidative stress impairs folding of MrpL32, resulting in its degradation by the m-AAA protease and decreased mitochondrial translation. Surprisingly, MrpL32 folding depends on its mitochondrial targeting sequence. Presequence-assisted folding of MrpL32 requires the complete import of the MrpL32 precursor before maturation occurs and therefore explains the need for post-translocational processing by the m-AAA protease rather than co-translocational cleavage by the general mitochondrial processing peptidase.
Insights
Mitochondrial proteases decide whether to process or degrade proteins. Protein folding, influenced by mitochondrial targeting, determines MrpL32 maturation, impacting neurodegeneration.
Area of Science:
- Mitochondrial biology
- Protein processing
- Neurodegenerative disease
Background:
- Mitochondrial AAA proteases (m-AAA) perform dual roles: protein processing and quality control.
- Dysfunction of m-AAA proteases is linked to neurodegeneration.
- The mechanism dictating m-AAA protease substrate fate (processing vs. degradation) remains unclear.
Purpose of the Study:
- To elucidate how m-AAA proteases differentiate between specific protein processing and complete degradation.
- To investigate the role of protein folding and mitochondrial targeting in m-AAA protease substrate selection.
- To understand the regulation of ribosomal protein MrpL32 maturation and its implications.
Main Methods:
- Investigated the processing and degradation of ribosomal protein MrpL32 by m-AAA proteases.
- Analyzed the role of a conserved CxxC-X(9)-CxxC motif in MrpL32 folding and maturation.
- Examined the impact of oxidative stress and mitochondrial targeting sequences on MrpL32 fate.
Main Results:
- Formation of a folded domain in MrpL32, mediated by a CxxC-X(9)-CxxC motif, halts N-terminal degradation and releases mature MrpL32.
- Oxidative stress disrupts MrpL32 folding, leading to its degradation by m-AAA proteases and reduced mitochondrial translation.
- Mitochondrial targeting sequence is crucial for MrpL32 folding, necessitating post-translational processing by m-AAA proteases.
Conclusions:
- Mitochondrial protein folding, guided by targeting sequences, dictates substrate selection by m-AAA proteases.
- Maturational processing of MrpL32 by m-AAA proteases is essential for ribosome biogenesis and mitochondrial function.
- Impaired folding and subsequent degradation of MrpL32 under oxidative stress may contribute to neurodegenerative processes.
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