Related Experiment Video
Updated: Jun 1, 2026

Generation of High Quality Chromatin Immunoprecipitation DNA Template for High-throughput Sequencing (ChIP-seq)
Published on: April 19, 2013
Association between type 2 diabetes and CDKN2A/B: a meta-analysis study
Xiao Yun Bao1, Cui Xie, Mao Sheng Yang
1Laboratory of Disorder Genes and Department of Pharmacology, College of Pharmacy, Chongqing Medical University, P.O. 380, 1 Yi Xue Yuan Road, Chongqing 400016, People's Republic of China.
Abstract:
Cyclin-dependent kinase inhibitor-2A/B (CDKN2A/B) has been reported as a candidate gene of type 2 diabetes (T2D) based on its chromosomal position and its important role in β-cell function and regeneration. However, studies to date have reported inconsistent findings regarding the association between T2D and CDKN2A/B. To clarify this inconsistence, we conducted a meta-analysis based on alleles and genotypes prevalence of rs10811661 and rs564398 in CDKN2A/B. The PubMed, EMBASE, and Medline databases were systematically reviewed for studies published between January, 2006, and November, 2010. A total of 35 reports were collected, among of them only 16 studies (including 24,407 cases and 33,937 controls) match the inclusion criteria and were selected for the statistical test. In the meta-analysis of published data, our results suggest that the rs10811661 T allele (OR 1.28, 95% CI 1.21-1.36, P < 1 × 10(-5)) and TT genotype (OR 1.32, 95% CI 1.22-1.43, P < 1 × 10(-5)) of CDKN2A/B were associated with type 2 diabetes respectively, but rs564398 was not (for allele only: OR 0.96, 95% CI 0.88-1.05, P = 0.35). The association between rs10811661 T allele and T2D was observed both in Asia (P < 1 × 10(-4)) and Europe ethnicity groups (P = 0.002). This meta-analysis yielded evidence that rs10811661 of CDKN2A/B confers risk for T2D. Larger studies with mixed ethnicity subjects are required to validate our findings.
Insights
The rs10811661 T allele in the CDKN2A/B gene is linked to an increased risk of type 2 diabetes (T2D). This meta-analysis confirms the association, particularly in European and Asian populations, warranting further investigation.
Area of Science:
- Genetics
- Endocrinology
- Metabolic Diseases
Background:
- The Cyclin-dependent kinase inhibitor-2A/B (CDKN2A/B) gene is implicated in type 2 diabetes (T2D) due to its role in pancreatic beta-cell function.
- Previous studies on the association between CDKN2A/B and T2D have yielded inconsistent results.
Purpose of the Study:
- To clarify the association between T2D and specific single nucleotide polymorphisms (SNPs) in the CDKN2A/B gene.
- To conduct a meta-analysis on the prevalence of alleles and genotypes for rs10811661 and rs564398 in CDKN2A/B.
Main Methods:
- Systematic review of PubMed, EMBASE, and Medline databases for studies published between January 2006 and November 2010.
- Meta-analysis of 16 selected studies, comprising 24,407 T2D cases and 33,937 controls.
- Statistical analysis of allele and genotype frequencies for rs10811661 and rs564398 within the CDKN2A/B gene.
Main Results:
- The rs10811661 T allele (OR 1.28) and TT genotype (OR 1.32) in CDKN2A/B were significantly associated with an increased risk of T2D.
- No significant association was found for rs564398 in CDKN2A/B with T2D.
- The association of the rs10811661 T allele with T2D was consistent across Asian and European ethnic groups.
Conclusions:
- The rs10811661 variant in the CDKN2A/B gene is a risk factor for type 2 diabetes.
- Further large-scale studies involving diverse ethnicities are needed to validate these findings.
Related Concept Videos
Type II Diabetes I: Introduction
Type II Diabetes II: Pathophysiology
Type I Diabetes II: Pathophysiology
Diabetes Mellitus: Type 2 and Gestational
M-Cdk Drives Transition Into Mitosis
Cyclin-dependent kinases, or Cdks, work in concert with cyclins to control cell cycle transitions. M-Cdk, a complex of Cdk1 bound to M cyclin, is a well-known example of this coordinated control that drives the transition from the G2 to the M phase.
M cyclin...
Psychoneuroimmunology: Diabetes and Cancer