Related Experiment Video
Updated: Jun 1, 2026

Tropomodulin 3 Overexpression as a Marker for Platinum Resistance and Immune Infiltration in Ovarian Cancer
Published on: August 2, 2024
MicroRNA processing and binding site polymorphisms are not replicated in the Ovarian Cancer Association Consortium
Jennifer Permuth-Wey1, Zhihua Chen, Ya-Yu Tsai
1Department of Cancer Epidemiology, Moffitt Cancer Center, University of South Florida, Tampa, FL 33612, USA.
Background:
Single nucleotide polymorphisms (SNP) in microRNA-related genes have been associated with epithelial ovarian cancer (EOC) risk in two reports, yet associated alleles may be inconsistent across studies.
Methods:
We conducted a pooled analysis of previously identified SNPs by combining genotype data from 3,973 invasive EOC cases and 3,276 controls from the Ovarian Cancer Association Consortium. We also conducted imputation to obtain dense coverage of genes and comparable genotype data for all studies. In total, 226 SNPs within 15 kb of 4 miRNA biogenesis genes (DDX20, DROSHA, GEMIN4, and XPO5) and 23 SNPs located within putative miRNA binding sites of 6 genes (CAV1, COL18A1, E2F2, IL1R1, KRAS, and UGT2A3) were genotyped or imputed and analyzed in the entire dataset.
Results:
After adjustment for European ancestry, no overall association was observed between any of the analyzed SNPs and EOC risk.
Conclusions:
Common variants in these evaluated genes do not seem to be strongly associated with EOC risk.
Impact:
This analysis suggests earlier associations between EOC risk and SNPs in these genes may have been chance findings, possibly confounded by population admixture. To more adequately evaluate the relationship between genetic variants and cancer risk, large sample sizes are needed, adjustment for population stratification should be carried out, and use of imputed SNP data should be considered.
Related Concept Videos
MicroRNAs
MicroRNAs
MicroRNAs
Single Nucleotide Polymorphisms-SNPs
Mismatch Repair
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Nucleolus

