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Related Concept Videos

Labeling DNA Probes03:31

Labeling DNA Probes

DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
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Microbial biosensors are analytical devices that utilize living microbes to detect specific substances through measurable signals. These devices consist of two main components: biosensing organisms and signal-transducing elements. Biosensing organisms, such as Escherichia coli or Saccharomyces cerevisiae, are typically housed in multiwell plates connected to transducers, enabling rapid, real-time detection of target analytes.Signal Generation MechanismWhen a target analyte—such as...

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Related Experiment Video

Updated: Jun 1, 2026

Studying DNA Looping by Single-Molecule FRET
11:27

Studying DNA Looping by Single-Molecule FRET

Published on: June 28, 2014

Fiber loop ringdown DNA and bacteria sensors.

Chamini Herath1, Chuji Wang, Malik Kaya

  • 1Department of Physics and Astronomy and the Energy Institute, Mississippi State University, Mississippi State, Mississippi 39762 , USA.

Journal of Biomedical Optics
|June 7, 2011
PubMed
Summary
This summary is machine-generated.

We developed a novel fiber loop ringdown evanescent field (FLRD-EF) biosensor for enhanced DNA and bacteria detection. This refractive index-based sensor offers high sensitivity, simplicity, and low cost for future biosensing arrays.

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Area of Science:

  • Biomedical Engineering
  • Optoelectronics
  • Molecular Diagnostics

Background:

  • Refractive index-based sensors are crucial for label-free biomolecule detection.
  • Existing methods often face limitations in sensitivity and complexity.
  • Evanescent field sensing offers high surface sensitivity but requires advanced techniques for signal enhancement.

Purpose of the Study:

  • To introduce a novel fiber loop ringdown evanescent field (FLRD-EF) biosensor.
  • To demonstrate enhanced sensitivity and label-free detection capabilities.
  • To showcase the potential for creating simple, low-cost, and highly sensitive biosensing arrays.

Main Methods:

  • Utilized a partially-etched single mode fiber as the sensor head.
  • Employed a fiber loop ringdown evanescent field (FLRD-EF) sensing scheme.
  • Implemented stepwise coating with poly-L-lysine and probe DNA for surface sensing.

Main Results:

  • Achieved bulk index-based detection of three single-strand DNA types and one bacterium.
  • Demonstrated label-free target DNA sensing using surface index changes.
  • The ringdown technique enhanced detection sensitivity through its multipass nature.

Conclusions:

  • The FLRD-EF biosensor is a promising platform for sensitive biomolecule detection.
  • The developed sensor exhibits superior simplicity, low cost, and high sensitivity compared to existing technologies.
  • Future development of FLRD-EF biosensor arrays could revolutionize molecular diagnostics.