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Related Experiment Video

Updated: May 31, 2026

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
09:51

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web

Published on: July 16, 2017

Menu-driven cloud computing and resource sharing for R and Bioconductor.

Hamid Bolouri1, Rajiv Dulepet, Michael Angerman

  • 1Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA. hbolouri@fhcrc.org

Bioinformatics (Oxford, England)
|June 21, 2011
PubMed
Summary
This summary is machine-generated.

CRdata.org is a free, open-source web server for cloud-based data analysis and script sharing. It offers public and private cloud options with user-controlled access for secure data management.

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Area of Science:

  • Bioinformatics
  • Computational Biology
  • Data Science

Background:

  • The need for accessible and secure platforms for data analysis and sharing in research.
  • Challenges in managing and collaborating on research data and scripts.

Purpose of the Study:

  • To introduce CRdata.org, a novel cloud-based web server.
  • To provide a free, open-source solution for running analyses and sharing data and R scripts.
  • To offer flexible options for both public and private cloud deployments.

Main Methods:

  • CRdata.org is a cloud-based web server accessible via point-and-click menus.
  • The platform is open-source, developed in Ruby, and available under the MIT License.
  • Users can leverage public services or launch private Amazon Elastic Computing Cloud (EC2) nodes for data and script storage on Amazon's Simple Storage Service (S3).

Main Results:

  • CRdata.org provides a user-friendly interface for complex data analyses.
  • It facilitates seamless sharing of data and R scripts among collaborators.
  • Secure private cloud options are available with user-controlled access.

Conclusions:

  • CRdata.org offers a versatile and accessible platform for research data management and analysis.
  • The open-source nature and flexible deployment options make it a valuable tool for the scientific community.
  • The web server simplifies collaboration and enhances data security through cloud integration.