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Updated: May 31, 2026

Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics
Published on: January 5, 2024
A second endolysin gene is fully embedded in-frame with the lysA gene of mycobacteriophage Ms6
Maria João Catalão1, Catarina Milho, Filipa Gil
1Centro de Patogénese Molecular, Unidade dos Retrovírus e Infecções Associadas, Faculdade de Farmácia, Universidade de Lisboa, Lisboa, Portugal.
Abstract:
Mycobacteriophages are dsDNA viruses that infect mycobacterial hosts. The mycobacteriophage Ms6 accomplishes lysis by producing two cell wall hydrolytic enzymes, Lysin A (LysA) that possesses a central peptidoglycan recognition protein (PGRP) super-family conserved domain with the amidase catalytic site, that cleaves the amide bond between the N-acetylmuramic acid and L-alanine residues in the oligopeptide crosslinking chains of the peptidoglycan and Lysin B (LysB) a mycolylarabinogalactan esterase that hydrolyzes the mycolic acids from the mycolyl-arabinogalactan-peptidoglycan complex. Examination of the endolysin (lysA) DNA sequence revealed the existence of an embedded gene (lysA(241)) encoded in the same reading frame and preceded by a consensus ribosome-binding site. In the present work we show that, even though lysA is essential for Ms6 viability, phage mutants that express only the longer (Lysin(384)) or the shorter (Lysin(241)) endolysin are viable, but defective in the normal timing, progression and completion of host cell lysis. In addition, both endolysins have peptidoglycan hydrolase activity and demonstrated broad growth inhibition activity against various gram-positive bacteria and mycobacteria.
Insights
Mycobacteriophage Ms6 lysis involves two enzymes, Lysin A and Lysin B. Mutants producing only one form of Lysin A show impaired lysis but retain broad antibacterial activity.
Area of Science:
- Virology
- Microbiology
- Biochemistry
Background:
- Mycobacteriophages are viruses infecting mycobacteria, crucial for understanding bacterial lysis mechanisms.
- The Ms6 phage utilizes two key enzymes, Lysin A (LysA) and Lysin B (LysB), for host cell lysis.
- LysA targets peptidoglycan, while LysB hydrolyzes the mycolylarabinogalactan-peptidoglycan complex.
Purpose of the Study:
- To investigate the function of the Ms6 phage Lysin A (LysA) and its embedded gene product.
- To determine the impact of expressing different LysA variants on phage lysis and antibacterial activity.
- To characterize the enzymatic activity and spectrum of inhibition of LysA variants.
Main Methods:
- Genetic analysis of the lysA gene and its embedded lysA(241) gene.
- Construction and characterization of Ms6 phage mutants expressing specific LysA variants.
- Enzymatic assays to determine peptidoglycan hydrolase activity.
- Growth inhibition assays against various bacterial species.
Main Results:
- The lysA gene is essential for Ms6 viability, but mutants expressing only Lysin(384) or Lysin(241) are viable.
- Both Lysin(384) and Lysin(241) exhibit peptidoglycan hydrolase activity.
- Phage mutants expressing single LysA variants showed defects in lysis timing, progression, and completion.
- Both endolysins demonstrated broad growth inhibition against Gram-positive bacteria and mycobacteria.
Conclusions:
- The Ms6 phage encodes two functional endolysins, Lysin(384) and Lysin(241), with distinct roles in lysis.
- While both endolysins possess antibacterial properties, their coordinated action is necessary for efficient host cell lysis.
- These findings contribute to understanding phage-mediated lysis and offer potential for novel antibacterial agents.
Related Concept Videos
Viral Replication: Lysogenic Cycle
Lysogenic Cycle of Bacteriophages
DNA Bacteriophages
Lytic Cycle of Bacteriophages
Viral Replication: Lytic Cycle
Lysosomal Hydrolases

