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Updated: May 31, 2026

Multiplex PCR Assay for Typing of Staphylococcal Cassette Chromosome Mec Types I to V in Methicillin-resistant Staphylococcus aureus
Published on: September 5, 2013
Usefulness of the restriction-modification test plus staphylococcal cassette chromosome mec types and
Carmen Potel Alvarellos1, Lucia Constenla Carames, Sonia Perez Castro
1Microbiology Laboratory, Complexo Hospitalario Universitario de Vigo, Vigo, Spain. carmen.potel.alvarellos@sergas.es
Abstract:
We studied the usefulness of the restriction-modification (RM) test, staphylococcal cassette chromosome (SCC) mec types, and Panton-Valentine leukocidin (PVL)-encoding phages to identify Staphylococcus aureus methicillin-resistant lineages and to differentiate clones that belong to the same lineage. A total of 108 methicillin-resistant S. aureus (MRSA) strains were characterized by pulsed-field gel electrophoresis (PFGE)--multi-locus sequence typing (MLST)--spa-typing. The RM correctly identified the lineages CC5, CC8, CC30, and CC398, but not CC25 and CC72. The SCCmec and RM combined analysis allowed differentiation between MLST types within the same lineage. Only 5 MRSA strains were PVL-positive. Four PVL-positive USA300 isolates carried elongated-head type PVL-encoding phages, while the sequence type (ST)-30 strain carried an icosahedral-head phage. The combination of the RM test method, SCCmec types, and PVL phage identification could be useful for MRSA typing purposes.
Insights
The restriction-modification (RM) test, staphylococcal cassette chromosome (SCC) mec types, and Panton-Valentine leukocidin (PVL)-encoding phages aid in identifying methicillin-resistant Staphylococcus aureus (MRSA) lineages and differentiating clones. Combining these methods offers a robust approach for MRSA typing.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Methicillin-resistant Staphylococcus aureus (MRSA) poses a significant public health threat.
- Accurate identification and differentiation of MRSA lineages and clones are crucial for effective epidemiological surveillance and control.
- Existing typing methods may have limitations in resolving closely related MRSA strains.
Purpose of the Study:
- To evaluate the utility of the restriction-modification (RM) test, staphylococcal cassette chromosome (SCC) mec types, and Panton-Valentine leukocidin (PVL)-encoding phages for MRSA lineage identification.
- To assess the ability of these markers to differentiate MRSA clones within the same lineage.
- To explore the combined potential of these methods for comprehensive MRSA typing.
Main Methods:
- Characterization of 108 MRSA strains using pulsed-field gel electrophoresis (PFGE), multi-locus sequence typing (MLST), and spa-typing.
- Assessment of RM test results for lineage identification.
- Analysis of SCC mec types and PVL phage characteristics.
- Correlation of typing results with established lineage and sequence types.
Main Results:
- The RM test accurately identified CC5, CC8, CC30, and CC398 lineages but not CC25 and CC72.
- Combined SCC mec and RM analysis enabled differentiation of MLST types within the same lineage.
- Only 5 MRSA strains were PVL-positive; USA300 isolates harbored elongated-head PVL phages, while ST-30 strains had icosahedral-head phages.
Conclusions:
- The RM test is a valuable tool for identifying major MRSA lineages.
- The combination of RM test and SCC mec typing enhances the differentiation of MRSA clones.
- PVL phage typing provides additional discriminatory power for specific MRSA strains.
- Integrating RM, SCC mec, and PVL phage identification offers a promising strategy for comprehensive MRSA typing.
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