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Using SecM Arrest Sequence as a Tool to Isolate Ribosome Bound Polypeptides
Published on: June 19, 2012
The binding cascade of SecB to SecA to SecY/E mediates preprotein targeting to the E. coli plasma membrane
F U Hartl1, S Lecker, E Schiebel
1Molecular Biology Institute, University of California, Los Angeles 90024-1570.
Insights
The cytosolic chaperone SecB and membrane-bound SecA protein form a two-stage system essential for E. coli protein export. SecB stabilizes precursor proteins and delivers them to SecA for translocation across the membrane.
Area of Science:
- Molecular Biology
- Cellular Biology
- Protein Transport
Background:
- Protein export in E. coli relies on cytosolic chaperones and membrane-bound translocases.
- The SecB chaperone prevents premature protein aggregation and targets them for export.
- SecA acts as a receptor and ATPase motor for preprotein translocation.
Purpose of the Study:
- To elucidate the interaction mechanism between SecB, precursor proteins, and the SecA receptor.
- To understand the dual role of SecB in precursor stabilization and delivery.
- To characterize the binding affinities within the protein export machinery.
Main Methods:
- Biochemical assays to determine binding affinities (Kd values).
- Analysis of protein-protein interactions in the E. coli protein export pathway.
- Characterization of the SecA receptor's interaction with SecB-precursor complexes.
Main Results:
- SecA receptor binds the proOmpA-SecB complex with high affinity (Kd ≈ 6 x 10⁻⁸ M).
- SecA directly recognizes both SecB and the precursor protein (proOmpA).
- SecB exhibits a dual function: stabilizing precursors and facilitating transfer to SecA.
Conclusions:
- SecB and SecA function as a sequential two-stage receptor system for E. coli protein export.
- The interaction between SecB and SecA is crucial for efficient precursor protein translocation.
- This system ensures proper targeting and delivery of proteins to the membrane translocase.
Abstract:
The export of many E. coli proteins such as proOmpA requires the cytosolic chaperone SecB and the membrane-bound preprotein translocase. Translocase is a multisubunit enzyme with the SecA protein as its peripheral membrane domain and the SecY/E protein as its integral domain. SecB, by binding to proOmpA in the cytosol, prevents its aggregation or association with membranes at nonproductive sites. The SecA receptor binds the proOmpA-SecB complex (Kd approximately 6 x 10(-8) M) through direct recognition of both the SecB (Kd approximately 2 x 10(-7) M) as well as the leader and mature domains of the precursor protein. SecB has a dual function in stabilizing the precursor and in passing it on to membrane-bound SecA, the next step in the pathway. SecA itself is bound to the membrane by its affinity (Kd approximately 4 x 10(-8) M) for SecY/E and for acidic lipids. The functions of SecB and SecA as a two-stage receptor system are linked by their affinity for each other.
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