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Related Concept Videos

Multicompartment Models: Overview01:14

Multicompartment Models: Overview

Multicompartment models are mathematical constructs that depict how drugs are distributed and eliminated within the body. They segment the body into several compartments, symbolizing various physiological or anatomical areas connected through drug transfer processes such as absorption, metabolism, distribution, and elimination.
These models offer a more comprehensive representation of drug behavior in the body than one-compartment models. They accommodate the complexity of drug distribution,...
Mechanistic Models: Overview of Compartment Models01:21

Mechanistic Models: Overview of Compartment Models

Mechanistic models, a category encompassing both physiological and compartmental modeling, differ from empirical models' approaches to incorporating known factors about the systems being modeled. Empirical models describe data with minimal assumptions, while mechanistic models aim to provide a robust description of available data by specifying assumptions and integrating known factors about the system. Compartmental analysis is a key example of a mechanistic model in pharmacokinetics and...
Model Approaches for Pharmacokinetic Data: Compartment Models01:14

Model Approaches for Pharmacokinetic Data: Compartment Models

Compartmental analysis is a widely adopted approach to characterizing drug pharmacokinetics. It uses compartment models that conceptualize the body as a collection of reversibly communicating compartments, each representing a group of tissues exhibiting similar drug distribution characteristics. The movement rate of the drug between these compartments is typically described by first-order kinetics.
Two primary types of compartment models are recognized: mammillary and catenary. The more...
Mechanistic Models: Compartment Models in Individual and Population Analysis01:23

Mechanistic Models: Compartment Models in Individual and Population Analysis

Mechanistic models are utilized in individual analysis using single-source data, but imperfections arise due to data collection errors, preventing perfect prediction of observed data. The mathematical equation involves known values (Xi), observed concentrations (Ci), measurement errors (εi), model parameters (ϕj), and the related function (ƒi) for i number of values. Different least-squares metrics quantify differences between predicted and observed values. The ordinary least squares (OLS)...
Three-Compartment Open Model01:06

Three-Compartment Open Model

The three-compartment open model is a pharmacokinetic model used to describe the distribution and elimination of drugs following extravascular administration. It comprises a central compartment representing the plasma and two peripheral compartments. The highly perfused peripheral compartment represents organs and tissues with a rich blood supply, such as the liver, kidneys, and lungs. The scarcely perfused peripheral compartment represents tissues with lower blood supply, such as adipose...
Pharmacokinetic Models: Comparison and Selection Criterion01:26

Pharmacokinetic Models: Comparison and Selection Criterion

Physiological and compartmental models are valuable tools used in studying biological systems. These models rely on differential equations to maintain mass balance within the system, ensuring an accurate representation of the dynamic processes at play.
Physiological models take a detailed approach by considering specific molecular processes. They can predict drug distribution, metabolism, and elimination changes, providing a comprehensive understanding of how drugs interact with the body.

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Related Experiment Video

Updated: May 31, 2026

Sedimentation Equilibrium of a Small Oligomer-forming Membrane Protein: Effect of Histidine Protonation on Pentameric Stability
09:49

Sedimentation Equilibrium of a Small Oligomer-forming Membrane Protein: Effect of Histidine Protonation on Pentameric Stability

Published on: April 2, 2015

Probabilistic multicompartmental model for interpreting DGT kinetics in sediments.

P Ciffroy1, Y Nia, J M Garnier

  • 1EDF, Division Recherche et Développement, Département Laboratoire National d'Hydraulique et Environnement, 78401 Chatou, France. philippe.ciffroy@edf.fr

Environmental Science & Technology
|June 29, 2011
PubMed
Summary

A new probabilistic model, DGT-PROFS, improves upon the DIFS model for interpreting diffusive gradients in thin-film (DGT) measurements. It addresses limitations in kinetic modeling and parameter selection, offering more accurate geochemical insights.

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The Benthic Exchange of O2, N2 and Dissolved Nutrients Using Small Core Incubations
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The Benthic Exchange of O2, N2 and Dissolved Nutrients Using Small Core Incubations

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Last Updated: May 31, 2026

Sedimentation Equilibrium of a Small Oligomer-forming Membrane Protein: Effect of Histidine Protonation on Pentameric Stability
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Published on: April 2, 2015

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The Benthic Exchange of O2, N2 and Dissolved Nutrients Using Small Core Incubations

Published on: August 3, 2016

Area of Science:

  • Environmental Science
  • Geochemistry
  • Analytical Chemistry

Background:

  • The Diffusive Gradients in Thin-Films (DGT) technique is widely used to measure metal bioavailability in soils and sediments.
  • The standard DGT-Induced Fluxes in Soils and Sediments (DIFS) model has limitations in accurately interpreting DGT measurements, particularly concerning complex accumulation kinetics and parameter uncertainty.

Purpose of the Study:

  • To address the limitations of the DIFS model in interpreting DGT measurements.
  • To propose a new probabilistic model, DGT-PROFS, that accounts for multiple kinetic stages and provides uncertainty ranges for model parameters.

Main Methods:

  • A novel probabilistic model, DGT-PROFS, was developed, incorporating two types of particulate binding sites instead of the single pool assumed by DIFS.
  • Probability Distribution Functions (PDFs) were used to fit experimental data and determine parameter uncertainty, moving beyond single-value estimations.
  • The DGT-PROFS model was validated using three formulated sediments with varying iron oxide content.

Main Results:

  • DGT-PROFS successfully fitted complete DGT experimental data sets, outperforming the DIFS-2D model.
  • The model provided a range of uncertainty values for each parameter, offering a more robust assessment of model fit.
  • Interpretation of parameter PDFs enabled differentiation of various geochemical behaviors and provided insights into metal dynamics.

Conclusions:

  • The DGT-PROFS model offers a significant advancement for interpreting DGT measurements in soils and sediments.
  • This probabilistic approach enhances the accuracy and reliability of geochemical assessments, particularly in complex matrices.
  • DGT-PROFS provides valuable information on metal dynamics and bioavailability, improving our understanding of environmental processes.