Related Experiment Video

Updated: May 31, 2026

Monitoring Stub1-Mediated Pexophagy
08:26

Monitoring Stub1-Mediated Pexophagy

Published on: May 12, 2023

PERK integrates autophagy and oxidative stress responses to promote survival during extracellular matrix detachment

Alvaro Avivar-Valderas1, Eduardo Salas, Ekaterina Bobrovnikova-Marjon

  • 1Department of Medicine, Tisch Cancer Institute, Black Family Stem Cell Institute, Mount Sinai School of Medicine, One Gustave L. Levy Place, New York, NY 10029, USA.

Insights

The endoplasmic reticulum kinase PERK promotes survival of detached mammary epithelial cells by enhancing autophagy and antioxidant responses, delaying anoikis. This pathway is dysregulated in breast cancer, suggesting a role in tumor cell survival.

Area of Science:

  • Cell Biology
  • Molecular Biology
  • Cancer Research

Background:

  • Mammary epithelial cells (MECs) undergo anoikis (programmed cell death) upon detachment from the extracellular matrix (ECM).
  • Detachment triggers reactive oxygen species (ROS) production and autophagy, with their balance influencing cell fate.
  • The role of the endoplasmic reticulum stress response in mediating survival during ECM detachment is not fully understood.

Purpose of the Study:

  • To investigate the role of the endoplasmic reticulum kinase PERK in MEC survival following ECM detachment.
  • To elucidate the molecular mechanisms by which PERK influences autophagy, ATP production, and antioxidant responses.
  • To examine the relevance of the PERK pathway in normal and cancerous human breast tissues.

Main Methods:

  • Loss-of-function studies using mammary epithelial cells.
  • Analysis of the PERK-eukaryotic translation initiation factor 2α (eIF2α)-ATF4-CHOP pathway.
  • Assessment of autophagy regulators (ATG6, ATG8), ATP levels, and ROS production.
  • In vivo studies using inducible PERK chimera activation.
  • Analysis of PERK and LC3 protein levels in mouse and human breast tissues.

Main Results:

  • ECM detachment activates the PERK pathway, leading to increased autophagy, sustained ATP levels, and reduced ROS.
  • This PERK-mediated response delays anoikis in detached MECs.
  • Activation of a PERK chimera promotes lumen formation in mammary epithelial acini.
  • PERK and LC3 levels are decreased in PERK-deficient mammary glands but elevated in human breast ductal carcinoma in situ (DCIS) compared to normal tissues.

Conclusions:

  • The PERK pathway is a critical mediator of survival for ECM-detached mammary epithelial cells.
  • PERK coordinates autophagy, ATP production, and antioxidant defenses to prevent anoikis.
  • Dysregulation of the PERK pathway, with increased PERK and LC3, is observed in human DCIS, suggesting its potential role in promoting tumor cell survival.

Related Concept Videos

Cellular Injury V: Apoptosis and Autophagy01:22

Cellular Injury V: Apoptosis and Autophagy

Cells respond to damage and stress through highly coordinated processes that decide whether they survive or undergo controlled self-destruction. Two major pathways involved in this regulation are apoptosis, a type of programmed cell death, and autophagy, a survival mechanism that helps cells adapt to adverse conditions.ApoptosisApoptosis removes aged or injured cells to maintain tissue balance. During this process, the cell shrinks, chromatin condenses and fragments, and membrane-bound...
The Unfolded Protein Response01:37

The Unfolded Protein Response

The ER is the hub of protein synthesis in a cell. It has robust systems to quality control protein folding and also for degradation of terminally misfolded proteins. Under normal conditions, a small proportion of misfolded proteins that cannot be salvaged need to be transported to the cytoplasm by the ER-associated degradation or ERAD pathways. However, if the ERAD cannot handle the misfolded proteins, the cell activates the unfolded protein response or UPR to adjust the protein folding...
Autophagy01:27

Autophagy

Autophagy is a self-digesting process by which a cell protects itself from threats both within and outside the cell, ranging from abnormal proteins to invading bacteria. In this process, obsolete components of the cell and invading microbes are degraded by hydrolytic enzymes active in an acidic environment of the lysosomal lumen.
An autophagic pathway consists of a series of signaling events activated in response to diverse stress and physiological conditions such as food deprivation,...
Autophagic Cell Death01:18

Autophagic Cell Death

Christian de Duve discovered “autophagy,” a process in which cellular components are engulfed by membrane-bound organelles called autophagosomes. The autophagosomes then fuse with lysosomes to digest the enclosed contents. Autophagy is generally activated in cells to prevent cell death. However, cell death is triggered when the damage is beyond repair.
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and pro-apoptotic...
Regulation of the Unfolded Protein Response01:31

Regulation of the Unfolded Protein Response

Inositol-requiring kinase one or IRE1 is the most conserved eukaryotic unfolded protein response (UPR) receptor. It is a type I transmembrane protein kinase receptor with a distinctive site-specific RNase activity. As the binding mechanics of the misfolded proteins with the N-terminal domain of IRE-1 are unclear, three binding models — direct, indirect, and allosteric -- are proposed for receptor activation. Nevertheless, it is known that once a misfolded protein associates with IRE1, it...
Delivery Pathways to the Lysosome01:36

Delivery Pathways to the Lysosome

Eukaryotic cells use different mechanisms to eliminate toxic waste obsolete and worn-out substances. Lysosomes play a pivotal role in this, and hence, these substances are carried to the lysosome from other parts of the cell and extracellular space through different pathways. The most elaborately studied pathways to the lysosome are the endocytic pathways.
Endocytosis
In endocytosis, the cell membrane takes up macromolecules and particles from the surrounding medium. Clathrin-mediated...