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Updated: May 31, 2026

Physical Isolation of Endospores from Environmental Samples by Targeted Lysis of Vegetative Cells
Published on: January 21, 2016
Detection of bacterial endospores in soil by terbium fluorescence
Andrea Brandes Ammann1, Linda Kölle, Helmut Brandl
1Institute of Evolutionary Biology and Environmental Studies (IEU), University of Zurich, Winterthurerstraße 190, CH-8057 Zurich, Switzerland.
Abstract:
Spore formation is a survival mechanism of microorganisms when facing unfavorable environmental conditions resulting in "dormant" states. We investigated the occurrence of bacterial endospores in soils from various locations including grasslands (pasture, meadow), allotment gardens, and forests, as well as fluvial sediments. Bacterial spores are characterized by their high content of dipicolinic acid (DPA). In the presence of terbium, DPA forms a complex showing a distinctive photoluminescence spectrum. DPA was released from soil by microwaving or autoclaving. The addition of aluminium chloride reduced signal quenching by interfering compounds such as phosphate. The highest spore content (up to 10(9) spores per gram of dry soil) was found in grassland soils. Spore content is related to soil type, to soil depth, and to soil carbon-to-nitrogen ratio. Our study might provide a basis for the detection of "hot spots" of bacterial spores in soil.
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