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Updated: May 31, 2026

09:09
Gene Expression Analyses in Human Follicles
Published on: February 17, 2023
Microdissection of gonadal tissues for gene expression analyses.
Anne Jørgensen1, Marlene Danner Dalgaard, Si Brask Sonne
1Department of Growth and Reproduction, Rigshospitalet, Copenhagen, Denmark.
Methods in Molecular Biology (Clifton, N.J.)
|July 16, 2011
Summary
This study introduces two novel staining protocols, Oil red O and NBT BCIP, for laser microdissection of specific cells. These methods enable gene expression analysis from isolated fat cells, steroid-producing cells, and alkaline phosphatase-expressing cells.
Area of Science:
- Cell Biology
- Molecular Biology
- Histology
Background:
- Laser microdissection (LMD) is crucial for isolating specific cell populations from complex tissues.
- Accurate cell identification for LMD often requires specialized staining beyond basic hematoxylin.
- Developing robust staining protocols is essential for advancing cell-specific molecular analyses.
Purpose of the Study:
- To establish and validate two new staining protocols for laser microdissection.
- To enable the isolation of specific cell types based on lipid content or enzyme expression.
- To facilitate subsequent gene expression analysis of microdissected cells.
Main Methods:
- Development of Oil red O staining for lipid-rich cells (e.g., fat cells, steroidogenic cells).
- Development of NBT BCIP staining for alkaline phosphatase-expressing cells (e.g., germ cells, stem cells).
- Application of protocols to frozen sections for laser microdissection of various cell types.
Main Results:
- Successfully applied Oil red O for identifying and microdissecting lipid-laden cells.
- Successfully applied NBT BCIP for identifying and microdissecting alkaline phosphatase-positive cells.
- Obtained RNA of sufficient quality for gene expression analysis from microdissected single cells, recommending linear amplification due to small yields.
Conclusions:
- The developed Oil red O and NBT BCIP staining protocols are effective for laser microdissection.
- These protocols support the isolation of diverse cell types for molecular studies across species.
- The methods ensure cell morphology preservation for high-quality RNA extraction and downstream gene expression analysis.

