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Updated: May 30, 2026

Using In Vitro Fluorescence Resonance Energy Transfer to Study the Dynamics Of Protein Complexes at a Millisecond Time Scale
Published on: March 14, 2019
The kinetics of ampicillin complexation by γ-cyclodextrins. A single molecule approach
Alina Asandei1, Loredana Mereuta, Tudor Luchian
1Department of Physics, Laboratory of Molecular Biophysics and Medical Physics, Alexandru I. Cuza University, Boulevard Carol I, No. 11, Iasi 700506, Romania.
Abstract:
Efficient measuring of binding thermodynamics of interactions between cyclodextrins (CDs) and antibiotics remains a challenge in the fields of physical chemistry and pharmaceutics. Here we report on a single-molecule investigation of pH- and voltage-dependent reversible interactions between ampicillin and γ-CDs, through monitoring of ionic current signatures across an α-hemolysin (α-HL) protein entrapping a γ-CD molecule. Our data reveal that electric and electro-osmotic driving forces alter the reversible reaction rates of ampicillin interaction with γ-CDs, as well as free energy changes accompanying the interaction. We found that close to neutral pH values facilitate more unstable γ-CD-ampicillin complexes, as well as a decreased affinity of the γ-CD-ampicillin reversible interaction, as compared to acidic pH. We posit that a pH-dependent partial electric charge on the ampicillin molecule and anionic selectivity of the α-HL·γCD complex account for the antibiotic and γ-CD intracavity manifestations. This approach may provide unique alternatives for the characterization of CD-guest interactions, useful for pharmaceutical formulations and tunable drug delivery systems.

