Related Experiment Video
Updated: May 30, 2026

11:47
Residue-specific Incorporation of Noncanonical Amino Acids into Model Proteins Using an Escherichia coli Cell-free Transcription-translation System
Published on: August 1, 2016
Genetic-code evolution for protein synthesis with non-natural amino acids.
Takahito Mukai1, Tatsuo Yanagisawa, Kazumasa Ohtake
1RIKEN Systems and Structural Biology Center, Tsurumi, Yokohama, Japan.
Biochemical and Biophysical Research Communications
|July 26, 2011
Summary
Scientists genetically engineered bacteria to incorporate non-natural amino acids into proteins, expanding protein capabilities. This method redefines the UAG stop codon, enabling the synthesis of novel proteins with enhanced functions.
Area of Science:
- Synthetic biology
- Protein engineering
- Molecular biology
Background:
- The genetic code's expansion with non-natural amino acids can enhance protein function and structure.
- Current methods for incorporating non-natural amino acids are often limited or inefficient.
Purpose of the Study:
- To develop a method for efficient genetic encoding of non-natural amino acids in Escherichia coli.
- To enable the synthesis of proteins with non-natural amino acids at specific sites.
- To demonstrate the utility of this method for large-scale protein production and post-translational modification.
Main Methods:
- Rapid codon reassignment in Escherichia coli to alter the meaning of the UAG stop codon.
- Engineering of E. coli BL21 strain for large-scale recombinant protein production.
- Cell-free synthesis utilizing engineered E. coli cell extract.
Main Results:
- Successfully reassigned the UAG codon in E. coli to encode tyrosine and lysine derivatives.
- Enabled the synthesis of proteins containing non-natural amino acids alongside canonical ones.
- Demonstrated large-scale production of a histone H4 protein with specific lysine acetylation using cell-free systems.
Conclusions:
- Codon reassignment is a powerful strategy for genetically encoding non-natural amino acids.
- This approach significantly expands the toolkit for protein engineering and functional diversification.
- The engineered E. coli system is suitable for producing modified proteins for various applications, including epigenetics research.
Related Concept Videos
From DNA to Protein
The flow of genetic information in cells from DNA to mRNA to protein is described by the central dogma, which states that genes specify the sequence of mRNAs, which in turn specify the sequence of amino acids making up all proteins. The decoding of one molecule to another is performed by specific proteins and RNAs. Because the information stored in DNA is so central to cellular function, it makes intuitive sense that the cell would make mRNA copies of this information for protein synthesis...
The Central Dogma
Overview
The Central Dogma
The central dogma explains the flow of genetic information from DNA nucleotides to the amino acid sequence of proteins.
RNA is the Missing Link Between DNA and Proteins
In the early 1900s, scientists discovered that DNA stores all the information needed for cellular functions and that proteins perform most of these functions. However, the mechanisms of converting genetic information into functional proteins remained unknown for many years. Initially, it was believed that a single gene is...
RNA is the Missing Link Between DNA and Proteins
In the early 1900s, scientists discovered that DNA stores all the information needed for cellular functions and that proteins perform most of these functions. However, the mechanisms of converting genetic information into functional proteins remained unknown for many years. Initially, it was believed that a single gene is...
Leaky Scanning
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Translation
Lesson: Translation
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life
Translation
Lesson: Translation
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life

