Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Propagation of Uncertainty from Random Error00:59

Propagation of Uncertainty from Random Error

An experiment often consists of more than a single step. In this case, measurements at each step give rise to uncertainty. Because the measurements occur in successive steps, the uncertainty in one step necessarily contributes to that in the subsequent step. As we perform statistical analysis on these types of experiments, we must learn to account for the propagation of uncertainty from one step to the next. The propagation of uncertainty depends on the type of arithmetic operation performed on...
Uncertainty: Overview00:59

Uncertainty: Overview

In analytical chemistry, we often perform repetitive measurements to detect and minimize inaccuracies caused by both determinate and indeterminate errors. Despite the cares we take, the presence of random errors means that repeated measurements almost never have exactly the same magnitude. The collective difference between these measurements - observed values - and the estimated or expected value is called uncertainty. Uncertainty is conventionally written after the estimated or expected value.
Propagation of Uncertainty from Systematic Error01:10

Propagation of Uncertainty from Systematic Error

The atomic mass of an element varies due to the relative ratio of its isotopes. A sample's relative proportion of oxygen isotopes influences its average atomic mass. For instance, if we were to measure the atomic mass of oxygen from a sample, the mass would be a weighted average of the isotopic masses of oxygen in that sample. Since a single sample is not likely to perfectly reflect the true atomic mass of oxygen for all the molecules of oxygen on Earth, the mass we obtain from this particular...
One-Compartment Open Model: Wagner-Nelson and Loo Riegelman Method for ka Estimation01:24

One-Compartment Open Model: Wagner-Nelson and Loo Riegelman Method for ka Estimation

This lesson introduces two critical methods in pharmacokinetics, the Wagner-Nelson and Loo-Riegelman methods, used for estimating the absorption rate constant (ka) for drugs administered via non-intravenous routes. The Wagner-Nelson method relates ka to the plasma concentration derived from the slope of a semilog percent unabsorbed time plot. However, it is limited to drugs with one-compartment kinetics and can be impacted by factors like gastrointestinal motility or enzymatic degradation.
On...
Uncertainty: Confidence Intervals00:54

Uncertainty: Confidence Intervals

The confidence interval is the range of values around the mean that contains the true mean. It is expressed as a probability percentage. The interpretation of a 95% confidence interval, for instance, is that the statistician is 95% confident that the true mean falls within the interval. The upper and lower limits of this range are known as confidence limits. The confidence limits for the true mean are estimated from the sample's mean, the standard deviation, and the statistical factor 't,' or...
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving01:29

Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving

Mechanistic models play a crucial role in algorithms for numerical problem-solving, particularly in nonlinear mixed effects modeling (NMEM). These models aim to minimize specific objective functions by evaluating various parameter estimates, leading to the development of systematic algorithms. In some cases, linearization techniques approximate the model using linear equations.
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Root anatomical gradients and cultivar differences underlie variation in root hydraulic properties in German winter wheat.

Journal of experimental botanyยท2026
Same author

Visualization of pore water colloids in intact soil using a new diffusive gradients in thin films (DGT)-based approach.

Environmental science. Nanoยท2026
Same author

The role of statistical power in context: implications for regulatory practices.

Integrated environmental assessment and managementยท2026
Same author

The role of background variability for interpreting biological relevance and statistical significance in Collembola soil field studies.

Integrated environmental assessment and managementยท2025
Same author

Predicting denitrification in groundwater utilizing redoxcline depth and aquifer thickness.

The Science of the total environmentยท2025
Same author

Workshop report: scoping for the development of a proposal for an OECD guidance document on fish vitellogenin assessment.

Integrated environmental assessment and managementยท2025

Related Experiment Video

Updated: May 30, 2026

Split Point Analysis and Uncertainty Quantification of Thermal-Optical Organic/Elemental Carbon Measurements
10:22

Split Point Analysis and Uncertainty Quantification of Thermal-Optical Organic/Elemental Carbon Measurements

Published on: September 7, 2019

Improving uncertainty analysis in kinetic evaluations using iteratively reweighted least squares.

Zhenglei Gao1, John W Green, Jan Vanderborght

  • 1Bayer CropScience, Monheim, Germany.

Environmental Toxicology and Chemistry
|July 26, 2011
PubMed
Summary

Standard nonlinear least squares (NLS) methods make unrealistic assumptions about data variance. An iteratively reweighted least squares (IRLS) algorithm provides more accurate confidence intervals for environmental fate model parameters, especially when error variances differ.

More Related Videos

A Workflow for Lipid Nanoparticle (LNP) Formulation Optimization using Designed Mixture-Process Experiments and Self-Validated Ensemble Models (SVEM)
13:54

A Workflow for Lipid Nanoparticle (LNP) Formulation Optimization using Designed Mixture-Process Experiments and Self-Validated Ensemble Models (SVEM)

Published on: August 18, 2023

Related Experiment Videos

Last Updated: May 30, 2026

Split Point Analysis and Uncertainty Quantification of Thermal-Optical Organic/Elemental Carbon Measurements
10:22

Split Point Analysis and Uncertainty Quantification of Thermal-Optical Organic/Elemental Carbon Measurements

Published on: September 7, 2019

A Workflow for Lipid Nanoparticle (LNP) Formulation Optimization using Designed Mixture-Process Experiments and Self-Validated Ensemble Models (SVEM)
13:54

A Workflow for Lipid Nanoparticle (LNP) Formulation Optimization using Designed Mixture-Process Experiments and Self-Validated Ensemble Models (SVEM)

Published on: August 18, 2023

Area of Science:

  • Environmental chemistry
  • Chemical kinetics
  • Environmental modeling

Background:

  • Environmental fate processes are modeled using kinetic parameters.
  • Standard nonlinear least squares (NLS) methods assume equal data variances, which is often unrealistic for degradation and metabolite formation data.
  • Unequal error variances between parent compounds and metabolites complicate parameter estimation.

Purpose of the Study:

  • To introduce and evaluate an iteratively reweighted least squares (IRLS) algorithm for estimating kinetic parameters and error variances.
  • To compare the performance of IRLS with standard NLS and Markov-Chain Monte-Carlo (MCMC) approaches for environmental fate modeling.

Main Methods:

  • Application of an iteratively reweighted least squares (IRLS) algorithm to obtain maximum likelihood estimates.
  • Comparison of IRLS with nonlinear least squares (NLS) and Markov-Chain Monte-Carlo (MCMC) methods.
  • Analysis of simulated data and real-world data from aerobic transformation of chemicals in soil.

Main Results:

  • IRLS provides reliable parameter estimates and realistic confidence intervals, even with unequal error variances.
  • NLS yields significantly different confidence intervals when error variances differ substantially between species.
  • IRLS-derived confidence intervals are consistent with those obtained from MCMC, suggesting greater accuracy.

Conclusions:

  • IRLS is a more robust method than NLS for estimating confidence intervals of kinetic parameters in environmental fate models.
  • The assumption of equal error variances in NLS can lead to unrealistic parameter uncertainty estimates.
  • IRLS offers a superior approach for handling heteroscedasticity in environmental data analysis.