Related Experiment Video
Updated: May 30, 2026

Growth-based Determination and Biochemical Confirmation of Genetic Requirements for Protein Degradation in Saccharomyces cerevisiae
Published on: February 16, 2015
Gene-dependent cell death in yeast
1Department of Pharmacology and Molecular Sciences, Johns Hopkins School of Medicine, Baltimore, MD, USA.
Abstract:
Caspase-dependent apoptotic cell death has been extensively studied in cultured cells and during embryonic development, but the existence of analogous molecular pathways in single-cell species is uncertain. This has reduced enthusiasm for applying the advanced genetic tools available for yeast to study cell death regulation. However, partial characterization in mammals of additional genetically encoded cell death mechanisms, which lead to a range of dying cell morphologies and necrosis, suggests potential applications for yeast genetics. In this light, we revisited the topic of gene-dependent cell death in yeast to determine the prevalence of yeast genes with the capacity to contribute to cell-autonomous death. We developed a rigorous strategy by allowing sufficient time for gene-dependent events to occur, but insufficient time to evolve new populations, and applied this strategy to the Saccharomyces cerevisiae gene knockout collection. Unlike sudden heat shock, a ramped heat stimulus delivered over several minutes with a thermocycler, coupled with assessment of viability by automated counting of microscopic colonies revealed highly reproducible gene-specific survival phenotypes, which typically persist under alternative conditions. Unexpectedly, we identified over 800 yeast knockout strains that exhibit significantly increased survival following insult, implying that these genes can contribute to cell death. Although these death mechanisms are yet uncharacterized, this study facilitates further exploration.
Insights
Researchers identified over 800 yeast genes that, when knocked out, increase cell survival after heat stress, suggesting these genes normally promote cell death in Saccharomyces cerevisiae.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- Caspase-dependent apoptosis is well-studied in multicellular organisms, but its existence in single-cell species like yeast remains unclear.
- This uncertainty limits the use of yeast genetics to study cell death regulation.
- Mammalian studies reveal diverse genetically encoded cell death pathways, suggesting potential yeast applications.
Purpose of the Study:
- To investigate the prevalence of gene-dependent cell death in yeast.
- To identify yeast genes that contribute to cell-autonomous death.
- To leverage yeast genetics for cell death research.
Main Methods:
- A rigorous strategy was employed, allowing time for gene-dependent events but not population evolution.
- A ramped heat stimulus was applied to the Saccharomyces cerevisiae gene knockout collection.
- Automated counting of microscopic colonies assessed viability and identified gene-specific survival phenotypes.
Main Results:
- Over 800 yeast knockout strains showed significantly increased survival after heat insult.
- This implies that the deleted genes normally contribute to cell death.
- Identified survival phenotypes were reproducible and often persisted under alternative conditions.
Conclusions:
- This study demonstrates that a significant number of yeast genes can contribute to programmed cell death.
- It provides a foundation for further research into the mechanisms of yeast cell death.
- The findings encourage the application of yeast genetics to study cell death regulation.
Related Concept Videos
Yeast Signaling
Overview of Cell Death
Cell death was observed in the early 19th century, but there was no experimental evidence to prove it. In 1842, Carl Vogt first discovered cell death in a metamorphic toad; however, it was not termed ‘cell death.’ Scientists discovered different cell death pathways only in the 20th century...
Autophagic Cell Death
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and pro-apoptotic...
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability

